RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 MICALCLQ6ZW33 695 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 WHAMMQ8TF30 809 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 ARL8AQ96BM9 186 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 hCG_1984214I3L0E3 225 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 BAG3O95817 575 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 LDHCP07864 332 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 MATR3P43243 847 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 NAPAP54920 295 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 PPP4CP60510 307 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 SLC7A5Q01650 507 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 LETM2Q2VYF4 491 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 ZNF713Q8N859 430 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
CPSF7-218ENST00000537641 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 LRRC4BQ9NT99 713 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 CEP72Q9P209 647 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
CPSF7-218ENST00000537641 AFF2P51816 1311 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
CPSF7-218ENST00000537641 CES2O00748 559 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 NCK2O43639 380 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 HEXIM1O94992 359 aaKnown RBP13.41□□□□□ -0.26
CPSF7-218ENST00000537641 SERPING1P05155 500 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 USP17L8P0C7I0 530 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 LIG3P49916 1009 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-218ENST00000537641 GRB10Q13322 594 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 SLC9C1Q4G0N8 1177 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 LARP4BQ92615 738 aaKnown RBP13.41□□□□□ -0.26
CPSF7-218ENST00000537641 MTMR8Q96EF0 704 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 CCDC43Q96MW1 224 aaKnown RBP13.41□□□□□ -0.26
CPSF7-218ENST00000537641 BLOC1S4Q9NUP1 217 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 GGA2Q9UJY4 613 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
CPSF7-218ENST00000537641 MYMKA6NI61 221 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 KIAA0754O94854 1291 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 EHHADHQ08426 723 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
CPSF7-218ENST00000537641 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-218ENST00000537641 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 EHD4Q9H223 541 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 MKNK2Q9HBH9 465 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
CPSF7-218ENST00000537641 TRPC5Q9UL62 973 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-218ENST00000537641 LTBP1Q14766 1721 aa13.4□□□□□ -0.27
CPSF7-218ENST00000537641 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 FSBPO95073 299 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 GYS1P13807 737 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 CXCR5P32302 372 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 TECP42680 631 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SLC1A4P43007 532 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 TNNC1P63316 161 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 GPSM2P81274 684 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 RASSF7Q02833 373 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 PDCLQ13371 301 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SEPT2Q15019 361 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 TDRD12Q587J7 1177 aaKnown RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 KAT2BQ92831 832 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 EPN3Q9H201 632 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 GEMIN8Q9NWZ8 242 aaKnown RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 BTNL10A8MVZ5 291 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 HSPA9P38646 679 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms