RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 IQCEQ6IPM2 695 aa6.76□□□□□ -1.33
SRGAP1-203ENST00000537585 TTLL7Q6ZT98 887 aa6.76□□□□□ -1.33
SRGAP1-203ENST00000537585 CHAMP1Q96JM3 812 aa6.76□□□□□ -1.33
SRGAP1-203ENST00000537585 JAM3Q9BX67 310 aa6.76□□□□□ -1.33
SRGAP1-203ENST00000537585 BLACEA4D250 179 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 K7ESM1 405 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 LRG1P02750 347 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 YOD1Q5VVQ6 348 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 TXNDC5Q8NBS9 432 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 ZNF652Q9Y2D9 606 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 NPFFR2Q9Y5X5 522 aa6.75□□□□□ -1.33
SRGAP1-203ENST00000537585 MYO1BO43795 1136 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 TADA3O75528 432 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ITGB3P05106 788 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ZNF28P17035 718 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 MLLT6P55198 1093 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ARID5AQ03989 594 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 LSAMPQ13449 338 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 NTRK3Q16288 839 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 DDR2Q16832 855 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 TBC1D10BQ4KMP7 808 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 TEPPQ6URK8 271 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 KCNT2Q6UVM3 1135 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 TMC5Q6UXY8 1006 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 EEPD1Q7L9B9 569 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ZCCHC14Q8WYQ9 949 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
SRGAP1-203ENST00000537585 CPP00450 1065 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 INSRRP14616 1297 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 SPATS1Q496A3 300 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 EMC4Q5J8M3 183 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 PIP4K2CQ8TBX8 421 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 PHF20Q9BVI0 1012 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 SSBP3Q9BWW4 388 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 DTLQ9NZJ0 730 aa6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 COA3Q9Y2R0 106 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-203ENST00000537585 H7BY64 318 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 HGSO14964 777 aaPredicted RBP6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 KLF4O43474 513 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 B4GALT3O60512 393 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 LTFP02788 710 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 TTLL6Q8N841 843 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 MBD6Q96DN6 1003 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 MYOTQ9UBF9 498 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
SRGAP1-203ENST00000537585 SLC27A2O14975 620 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 GTF2A2P52657 109 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 GRIN1Q05586 938 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 MAP4K2Q12851 820 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 ERICH6BQ5W0A0 696 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 OSBP2Q969R2 916 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 CCDC140Q96MF4 163 aa6.71□□□□□ -1.34
SRGAP1-203ENST00000537585 MROH6A6NGR9 719 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 PLATP00750 562 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 COL6A2P12110 1019 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 NKX3-2P78367 333 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 ADAM17P78536 824 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 PUM1Q14671 1186 aaKnown RBP eCLIP6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 FAM26FQ5R3K3 315 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 PRAMEF18Q5VWM3 479 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 YTHDC1Q96MU7 727 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 PTPN18Q99952 460 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 EPB41L1Q9H4G0 881 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 CROTQ9UKG9 612 aa6.7□□□□□ -1.34
SRGAP1-203ENST00000537585 ASXL2Q76L83 1435 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 PRODHO43272 600 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 COL6A1P12109 1028 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 MAGEA10P43363 369 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 DBX2Q6ZNG2 339 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 KCTD13Q8WZ19 329 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 SMPD4Q9NXE4 827 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 ASH2LQ9UBL3 628 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 ST6GALNAC2Q9UJ37 374 aa6.69□□□□□ -1.34
SRGAP1-203ENST00000537585 NKRFO15226 690 aaKnown RBP eCLIP6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 DGKIO75912 1065 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 IL13P35225 146 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 KCNJ15Q99712 375 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 GPR27Q9NS67 375 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 IGSF5Q9NSI5 407 aa6.68□□□□□ -1.34
SRGAP1-203ENST00000537585 ZXDCQ2QGD7 858 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-203ENST00000537585 LOXL4Q96JB6 756 aa6.67□□□□□ -1.34
SRGAP1-203ENST00000537585 GMLQ99445 158 aa6.67□□□□□ -1.34
SRGAP1-203ENST00000537585 AARSD1Q9BTE6 412 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms