RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 FEZ1Q99689 392 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 KRTAP4-2Q9BYR5 136 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
YBX3-206ENST00000536823 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 PCDHGA11Q9Y5H2 935 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 MYPNQ86TC9 1320 aa8.43□□□□□ -1.06
YBX3-206ENST00000536823 SERTM1A2A2V5 107 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 RNF113AO15541 343 aaKnown RBP8.42□□□□□ -1.06
YBX3-206ENST00000536823 USP14P54578 494 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 HERVK_113P62684 666 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 PRKCZQ05513 592 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 SEPT2Q15019 361 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 RAB3GAP1Q15042 981 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 LRRFIP1Q32MZ4 808 aaKnown RBP8.42□□□□□ -1.06
YBX3-206ENST00000536823 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 ANKRD45Q5TZF3 282 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 C12orf60Q5U649 245 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 AMOTL1Q8IY63 956 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 RAET1EQ8TD07 263 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 ACER1Q8TDN7 264 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
YBX3-206ENST00000536823 STRBPQ96SI9 672 aaKnown RBP8.42□□□□□ -1.06
YBX3-206ENST00000536823 KIAA1683Q9H0B3 1180 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 MORF4L1Q9UBU8 362 aa8.42□□□□□ -1.06
YBX3-206ENST00000536823 ROBO3Q96MS0 1386 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 CYP2D7A0A087X1C5 515 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 GSG1L2A8MUP6 293 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 USP17L21D6R901 530 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 SMIM22K7EJ46 135 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 TNPO2O14787 897 aaKnown RBP8.41□□□□□ -1.06
YBX3-206ENST00000536823 GPAA1O43292 621 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 MED26O95402 600 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 GRK4P32298 578 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
YBX3-206ENST00000536823 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 TMEM179Q6ZVK1 233 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
YBX3-206ENST00000536823 EXOC6Q8TAG9 804 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 DYNLL2Q96FJ2 89 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 FSD1Q9BTV5 496 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 EPB41L4AQ9HCS5 686 aaPredicted RBP8.41□□□□□ -1.06
YBX3-206ENST00000536823 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 ARPP21Q9UBL0 812 aaPredicted RBP8.41□□□□□ -1.06
YBX3-206ENST00000536823 STAP2Q9UGK3 403 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 GABRQQ9UN88 632 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
YBX3-206ENST00000536823 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 M0R2C6 588 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
YBX3-206ENST00000536823 AKR1B1P15121 316 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 GNAT2P19087 354 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 VCAM1P19320 739 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 CDK8P49336 464 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 FLT3LGP49771 235 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 PDE1AP54750 535 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 PTK7Q13308 1070 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 SBK1Q52WX2 424 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 CTR9Q6PD62 1173 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 SMC5Q8IY18 1101 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 COA7Q96BR5 231 aa8.4□□□□□ -1.06
YBX3-206ENST00000536823 P2RX7Q99572 595 aaKnown RBP8.4□□□□□ -1.06
YBX3-206ENST00000536823 RWDD1Q9H446 243 aaPredicted RBP8.4□□□□□ -1.06
YBX3-206ENST00000536823 GREB1LQ9C091 1923 aaPredicted RBP8.4□□□□□ -1.06
YBX3-206ENST00000536823 A0A1W2PRG0 241 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 ADCY3O60266 1144 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 ATP1A2P50993 1020 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 EPHA4P54764 986 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 ERVK-24P63145 666 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 ICA1Q05084 483 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
YBX3-206ENST00000536823 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 LNPKQ9C0E8 428 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 RPAP3Q9H6T3 665 aaPredicted RBP8.39□□□□□ -1.07
YBX3-206ENST00000536823 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 TXNRD2Q9NNW7 524 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 RABGAP1Q9Y3P9 1069 aa8.39□□□□□ -1.07
YBX3-206ENST00000536823 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 PEX10O60683 326 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 TGFB1P01137 390 aa8.38□□□□□ -1.07
YBX3-206ENST00000536823 EN2P19622 333 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms