RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 ZSWIM6Q9HCJ5 1215 aa16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
SCNN1A-209ENST00000536411 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 GGPS1O95749 300 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 UBA1P22314 1058 aaKnown RBP16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 RFC2P35250 354 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 USP17L6PQ6QN14 398 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 SH3RF1Q7Z6J0 888 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 CAGE1Q8TC20 777 aa16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 ZNF215Q9UL58 517 aaPredicted RBP16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 V9GY48 417 aaPredicted RBP16.29■□□□□ 0.2
SCNN1A-209ENST00000536411 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 CPLX1O14810 134 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 CDKL5O76039 1030 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 F2P00734 622 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 SCG2P13521 617 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 RAB11FIP4Q86YS3 637 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 CMTR1Q8N1G2 835 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 C7orf31Q8N865 590 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 COPS5Q92905 334 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 ZNF274Q96GC6 653 aaPredicted RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 RNPC3Q96LT9 517 aaKnown RBP16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
SCNN1A-209ENST00000536411 TMEM265A0A087WTH1 108 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 B4GALT4O60513 344 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 GNAT1P11488 350 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 PSMC6P62333 389 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 FUT2Q10981 343 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 IL31RAQ8NI17 732 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 PCDHA6Q9UN73 950 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 PCDHA8Q9Y5H6 950 aa16.27■□□□□ 0.2
SCNN1A-209ENST00000536411 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 RGS20O76081 388 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 IFNAR1P17181 557 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 MRPS9P82933 396 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 MTMR1Q13613 665 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 MFSD10Q14728 455 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 NOC4LQ9BVI4 516 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 PPP1R12CQ9BZL4 782 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 IL23AQ9NPF7 189 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
SCNN1A-209ENST00000536411 STXBP3O00186 592 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 ACTN1P12814 892 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 XBP1P17861 261 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 CDC27P30260 824 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 PSEN2P49810 448 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 PTGISQ16647 500 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 NIPA1Q7RTP0 329 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 AFAP1L1Q8TED9 768 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 ZMYND12Q9H0C1 365 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 FAM217BQ9NTX9 383 aaPredicted RBP16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
SCNN1A-209ENST00000536411 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 PDIA3P30101 505 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 SHHQ15465 462 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 REXO1Q8N1G1 1221 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 IL27Q8NEV9 243 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 ANO3Q9BYT9 981 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
SCNN1A-209ENST00000536411 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 HAS3O00219 553 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 CAND2O75155 1236 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 DEXIO95424 95 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 CPA1P15085 419 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 ITGB8P26012 769 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 ZNF76P36508 570 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 SREBF1P36956 1147 aa16.23■□□□□ 0.19
SCNN1A-209ENST00000536411 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms