RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
LIG1-203ENST00000536218 BAIAP2L1Q9UHR4 511 aa15.44■□□□□ 0.06
LIG1-203ENST00000536218 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
LIG1-203ENST00000536218 FAM196BA6NMK8 535 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 KRT14P02533 472 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 AKR1B1P15121 316 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 PSMD2Q13200 908 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 NUP88Q99567 741 aaPredicted RBP15.43■□□□□ 0.06
LIG1-203ENST00000536218 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 TCP11L1Q9NUJ3 509 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 PLSCR1O15162 318 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 ATP2C1P98194 919 aaPredicted RBP15.43■□□□□ 0.06
LIG1-203ENST00000536218 SLC7A5Q01650 507 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 NFIAQ12857 509 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 EZH2Q15910 746 aaKnown RBP15.43■□□□□ 0.06
LIG1-203ENST00000536218 IL17AQ16552 155 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 PIGSQ96S52 555 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 EPN3Q9H201 632 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 ROBO3Q96MS0 1386 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
LIG1-203ENST00000536218 BUB1BO60566 1050 aaPredicted RBP15.42■□□□□ 0.06
LIG1-203ENST00000536218 CCT6AP40227 531 aaKnown RBP15.42■□□□□ 0.06
LIG1-203ENST00000536218 ERVK-24P63145 666 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 MYO1EQ12965 1108 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 CCDC181Q5TID7 509 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 JAKMIP2Q96AA8 810 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 PAGE5Q96GU1 130 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 JADE2Q9NQC1 790 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 ATXN2Q99700 1313 aaKnown RBP15.42■□□□□ 0.06
LIG1-203ENST00000536218 TARSL2A2RTX5 802 aaKnown RBP15.42■□□□□ 0.06
LIG1-203ENST00000536218 BMP15O95972 392 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 RWDD2BP57060 319 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 NLRP14Q86W24 1093 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 HDAC7Q8WUI4 952 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 PP2D1A8MPX8 630 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 SLC8A1P32418 973 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 KANK3Q6NY19 840 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 TLDC1Q6P9B6 456 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 CNGA4Q8IV77 575 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 ZFPM1Q8IX07 1006 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 YIPF3Q9GZM5 350 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 PCDHA6Q9UN73 950 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 PCDHA8Q9Y5H6 950 aa15.42■□□□□ 0.06
LIG1-203ENST00000536218 STXBP3O00186 592 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 CKAP4Q07065 602 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 CDC42EP5Q6NZY7 148 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 TMTC1Q8IUR5 882 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 ZSCAN29Q8IWY8 852 aaPredicted RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 TSEN2Q8NCE0 465 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 ENOX1Q8TC92 643 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 PLCD4Q9BRC7 762 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 A0A1B0GTH6 734 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 SMCO2A6NFE2 343 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 SNUPNO95149 360 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 SKOR1P84550 965 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 FILIP1LQ4L180 1135 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 YTHDF3Q7Z739 585 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 MYCBPAPQ8TBZ2 947 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 NSMCE1Q8WV22 266 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 TEKT1Q969V4 418 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 NUCKS1Q9H1E3 243 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 BARHL2Q9NY43 387 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
LIG1-203ENST00000536218 DACH1Q9UI36 760 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
LIG1-203ENST00000536218 GYPCP04921 128 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 HPDP32754 393 aaPredicted RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 LETM2Q2VYF4 491 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 CCDC122Q5T0U0 273 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 BIN2Q9UBW5 565 aaPredicted RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 SERPINB13Q9UIV8 391 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 H0YIN7 160 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 SARSP49591 514 aaKnown RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 MORC3Q14149 939 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 PLCB4Q15147 1175 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 SPRED3Q2MJR0 410 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 AENQ8WTP8 325 aaKnown RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 ITFG2Q969R8 447 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 COA7Q96BR5 231 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 PDE2AO00408 941 aaPredicted RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 BACH1O14867 736 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 PPP1R37O75864 691 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 PTGISQ16647 500 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 SOGA3Q5TF21 947 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 CAPRIN2Q6IMN6 1127 aaKnown RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
LIG1-203ENST00000536218 STAMBPL1Q96FJ0 436 aa15.4■□□□□ 0.06
LIG1-203ENST00000536218 MED15Q96RN5 788 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms