RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 MOXD1Q6UVY6 613 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 OGFOD1Q8N543 542 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 OR8K1Q8NGG5 319 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 ETNPPLQ8TBG4 499 aa14.89□□□□□ -0.03
VPS33B-202ENST00000535906 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
VPS33B-202ENST00000535906 FAM86B1E9PN63 330 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SSBP05455 408 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS33B-202ENST00000535906 FAM86B2P0C5J1 330 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SPIRE1Q08AE8 756 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 LENG9Q96B70 501 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 DNAJC7Q99615 494 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 TTYH3Q9C0H2 523 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 AGPAT5Q9NUQ2 364 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.88□□□□□ -0.03
VPS33B-202ENST00000535906 HDAC9Q9UKV0 1011 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 KDM3AQ9Y4C1 1321 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 KIF5CO60282 957 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 MED24O75448 989 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 ZRANB2O95218 330 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SREBF1P36956 1147 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 STAT2P52630 851 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 COASYQ13057 564 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 PSMD2Q13200 908 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 WDR59Q6PJI9 974 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 TMCO3Q6UWJ1 677 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 RSRC2Q7L4I2 434 aaKnown RBP14.88□□□□□ -0.03
VPS33B-202ENST00000535906 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 GPR161Q8N6U8 529 aaKnown RBP14.88□□□□□ -0.03
VPS33B-202ENST00000535906 VEZTQ9HBM0 779 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
VPS33B-202ENST00000535906 Q4G0T1 1027 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 DEFB132Q7Z7B7 95 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 SLF1Q9BQI6 1058 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 TMEM39BQ9GZU3 492 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 SYNPO2Q9UMS6 1093 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 FOSP01100 380 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-202ENST00000535906 PLA2G4BP0C869 781 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 TRIM21P19474 475 aaKnown RBP14.87□□□□□ -0.03
VPS33B-202ENST00000535906 FAM83BQ5T0W9 1011 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 MCTP2Q6DN12 878 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 MIGA2Q7L4E1 593 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 PANK4Q9NVE7 773 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
VPS33B-202ENST00000535906 NPHP3-ACAD11A0A0J9YXS1 232 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-202ENST00000535906 LRRC63Q05C16 580 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 FGFBP2Q9BYJ0 223 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 NDUFA10O95299 355 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-202ENST00000535906 RAD51AP2Q09MP3 1159 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 LRRC55Q6ZSA7 311 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 CATSPER3Q86XQ3 398 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 RABGGTAQ92696 567 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 GOLGA1Q92805 767 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 ERGIC2Q96RQ1 377 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-202ENST00000535906 TBC1D7Q9P0N9 293 aa14.86□□□□□ -0.03
VPS33B-202ENST00000535906 REXO2Q9Y3B8 237 aaKnown RBP14.86□□□□□ -0.03
VPS33B-202ENST00000535906 EPN1Q9Y6I3 576 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-202ENST00000535906 TBX3O15119 743 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 CYP11B2P19099 503 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ERCC3P19447 782 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 CIITAP33076 1130 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ARHGAP25P42331 645 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 FAM26FQ5R3K3 315 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 GPBP1Q86WP2 473 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 NUP58Q9BVL2 599 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 GOPCQ9HD26 462 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 PCDHA2Q9Y5H9 948 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 UTRNP46939 3433 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 PIK3CDO00329 1044 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 MSH4O15457 936 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ATP8B1O43520 1251 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 KIF20AO95235 890 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 SPATA31C1P0DKV0 1188 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 SLC12A3P55017 1021 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 PSMC6P62333 389 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 TUBB2AQ13885 445 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
VPS33B-202ENST00000535906 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ARSHQ5FYA8 562 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 ZNF569Q5MCW4 686 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 NCAPH2Q6IBW4 605 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 RETREG2Q8NC44 543 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 PCMTD1Q96MG8 357 aaPredicted RBP14.85□□□□□ -0.03
VPS33B-202ENST00000535906 TUBB2BQ9BVA1 445 aa14.85□□□□□ -0.03
VPS33B-202ENST00000535906 NDST4Q9H3R1 872 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms