RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 PSMC6P62333 389 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 PSRC1Q6PGN9 363 aaPredicted RBP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 ZNF654Q8IZM8 581 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 COPS5Q92905 334 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC60-202ENST00000535685 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 HIPK3Q9H422 1215 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 FRMPD4Q14CM0 1322 aa12.5□□□□□ -0.41
CCDC60-202ENST00000535685 GBF1Q92538 1859 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 RGS20O76081 388 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 MYL3P08590 195 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CALM1P0DP23 149 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CALM2P0DP24 149 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CALM3P0DP25 149 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CSF2RAP15509 400 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CYP2C18P33260 490 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 LAMC2Q13753 1193 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 PGM5Q15124 567 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 CTCFLQ8NI51 663 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-202ENST00000535685 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
CCDC60-202ENST00000535685 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 STAM2O75886 525 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 PFKMP08237 780 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 MMP3P08254 477 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
CCDC60-202ENST00000535685 LY6KQ17RY6 165 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 ZNF365Q70YC5 407 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 HOMER1Q86YM7 354 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
CCDC60-202ENST00000535685 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 PPP1R12CQ9BZL4 782 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 WNT8AQ9H1J5 351 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 ANO2Q9NQ90 1003 aa12.48□□□□□ -0.41
CCDC60-202ENST00000535685 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 HOXA13P31271 388 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-202ENST00000535685 ICAM3P32942 547 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 DGKDQ16760 1214 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 KAT2BQ92831 832 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
CCDC60-202ENST00000535685 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
CCDC60-202ENST00000535685 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-202ENST00000535685 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
CCDC60-202ENST00000535685 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 NCOR1O75376 2440 aa12.47□□□□□ -0.41
CCDC60-202ENST00000535685 DOCK5Q9H7D0 1870 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 CHD9Q3L8U1 2897 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 HAS3O00219 553 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 CDC45O75419 566 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 FGBP02675 491 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 CCND2P30279 289 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 RFC2P35250 354 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 EXOSC10Q01780 885 aaKnown RBP12.46□□□□□ -0.41
CCDC60-202ENST00000535685 RBL2Q08999 1139 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-202ENST00000535685 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.41
CCDC60-202ENST00000535685 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
CCDC60-202ENST00000535685 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 KCNB2Q92953 911 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-202ENST00000535685 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
CCDC60-202ENST00000535685 MEIS2O14770 477 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 GPR37O15354 613 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 F2P00734 622 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 ACRP10323 421 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 CYP2C9P11712 490 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 DNAJB2P25686 324 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 RCAN1P53805 252 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 CCL23P55773 120 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 BFSP2Q13515 415 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 KRT32Q14532 448 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 POTEHQ6S545 545 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
CCDC60-202ENST00000535685 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
CCDC60-202ENST00000535685 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 CTAGE1Q96RT6 745 aa12.45□□□□□ -0.42
CCDC60-202ENST00000535685 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms