RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 H3BNC9 293 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
LINC01089-204ENST00000535643 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
LINC01089-204ENST00000535643 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
LINC01089-204ENST00000535643 ERCC3P19447 782 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 CBX1P83916 185 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 GPM6BQ13491 265 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 EPC2Q52LR7 807 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 DRC7Q8IY82 874 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 KREMEN2Q8NCW0 462 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 FLCNQ8NFG4 579 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 LINS1Q8NG48 757 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 PLA2G12BQ9BX93 195 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 IMPACTQ9P2X3 320 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 NCDNQ9UBB6 729 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
LINC01089-204ENST00000535643 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
LINC01089-204ENST00000535643 AOC1P19801 751 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 RFC2P35250 354 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01089-204ENST00000535643 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
LINC01089-204ENST00000535643 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 IQCB1Q15051 598 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 ZC3H14Q6PJT7 736 aaKnown RBP13.6□□□□□ -0.23
LINC01089-204ENST00000535643 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 UBALD2Q8IYN6 164 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 ANO10Q9NW15 660 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 FAM184BQ9ULE4 1060 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 USP15Q9Y4E8 981 aaPredicted RBP13.6□□□□□ -0.23
LINC01089-204ENST00000535643 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 CYP2C9P11712 490 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 PICALMQ13492 652 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 TOB2Q14106 344 aaPredicted RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 VARS2Q5ST30 1063 aaKnown RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 N4BP2L1Q5TBK1 243 aaPredicted RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 CEP135Q66GS9 1140 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 NYAP1Q6ZVC0 841 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 AACSQ86V21 672 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 NAT10Q9H0A0 1025 aaKnown RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 SMOC2Q9H3U7 446 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 IGFLR1Q9H665 355 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 C9orf78Q9NZ63 289 aaPredicted RBP13.59□□□□□ -0.23
LINC01089-204ENST00000535643 LAMA4Q16363 1823 aa13.59□□□□□ -0.23
LINC01089-204ENST00000535643 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
LINC01089-204ENST00000535643 SLC30A4O14863 429 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 CCP110O43303 1012 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 ADCY6O43306 1168 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 NRDCO43847 1150 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 NDUFV1P49821 464 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 JAG1P78504 1218 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.24
LINC01089-204ENST00000535643 CATSPERGQ6ZRH7 1159 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 ABRAQ8N0Z2 381 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 KRT222Q8N1A0 295 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
LINC01089-204ENST00000535643 TSC1Q92574 1164 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 BPIFA3Q9BQP9 254 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
LINC01089-204ENST00000535643 FAM53CQ9NYF3 392 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 CLEC1BQ9P126 229 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 SALL1Q9NSC2 1324 aa13.58□□□□□ -0.24
LINC01089-204ENST00000535643 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 H7C1W4 665 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 GRM8O00222 908 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 CPA1P15085 419 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 GJA9P57773 515 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 ADAM15Q13444 863 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 FAM117BQ6P1L5 589 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 CCDC73Q6ZRK6 1079 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 NECAB1Q8N987 351 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 CCDC150Q8NCX0 1101 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 SPC25Q9HBM1 224 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
LINC01089-204ENST00000535643 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms