RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 ICAM3P32942 547 aa24.97■■□□□ 1.59
SSPN-204ENST00000535504 MRPS9P82933 396 aaKnown RBP24.97■■□□□ 1.59
SSPN-204ENST00000535504 SNX17Q15036 470 aa24.97■■□□□ 1.59
SSPN-204ENST00000535504 JAKMIP3Q5VZ66 844 aa24.97■■□□□ 1.59
SSPN-204ENST00000535504 GALNT17Q6IS24 598 aa24.97■■□□□ 1.59
SSPN-204ENST00000535504 SPATA33Q96N06 139 aa24.97■■□□□ 1.59
SSPN-204ENST00000535504 PRDM5Q9NQX1 630 aaPredicted RBP24.97■■□□□ 1.59
SSPN-204ENST00000535504 A6NJR5 290 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 ARVCFO00192 962 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 CTAGE5O15320 804 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 MAFGO15525 162 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 MTMR1Q13613 665 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 ME3Q16798 604 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 TMEM63BQ5T3F8 832 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 AFG1LQ8WV93 481 aa24.96■■□□□ 1.59
SSPN-204ENST00000535504 EMID1Q96A84 441 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 ZFP91Q96JP5 570 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 LBHD1Q9BQE6 289 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 SH2B1Q9NRF2 756 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 ORC3Q9UBD5 711 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 ZMYND8Q9ULU4 1186 aaPredicted RBP24.96■■□□□ 1.59
SSPN-204ENST00000535504 UBA1P22314 1058 aaKnown RBP24.95■■□□□ 1.58
SSPN-204ENST00000535504 IRX5P78411 483 aaPredicted RBP24.95■■□□□ 1.58
SSPN-204ENST00000535504 ARHGAP1Q07960 439 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 ITGA7Q13683 1181 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 TRIM29Q14134 588 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 CELF3Q5SZQ8 465 aaKnown RBP24.95■■□□□ 1.58
SSPN-204ENST00000535504 NECAB1Q8N987 351 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 PPTC7Q8NI37 304 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 PGBD1Q96JS3 809 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 KATNAL1Q9BW62 490 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 BRMS1Q9HCU9 246 aa24.95■■□□□ 1.58
SSPN-204ENST00000535504 SPATA31C2B4DYI2 1134 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 RGS20O76081 388 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 MMP3P08254 477 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 PTGS1P23219 599 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 SREBF1P36956 1147 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 TOX2Q96NM4 488 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 SENP7Q9BQF6 1050 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 TMEM260Q9NX78 707 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 PCDHA4Q9UN74 947 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 ALPK3Q96L96 1907 aa24.94■■□□□ 1.58
SSPN-204ENST00000535504 CLTBP09497 229 aa24.93■■□□□ 1.58
SSPN-204ENST00000535504 CLK2P49760 499 aaKnown RBP24.93■■□□□ 1.58
SSPN-204ENST00000535504 CHMP4BP1P59074 171 aa24.93■■□□□ 1.58
SSPN-204ENST00000535504 PURAQ00577 322 aaKnown RBP24.93■■□□□ 1.58
SSPN-204ENST00000535504 TLE2Q04725 743 aa24.93■■□□□ 1.58
SSPN-204ENST00000535504 JADE2Q9NQC1 790 aa24.93■■□□□ 1.58
SSPN-204ENST00000535504 TCEAL9Q9UHQ7 104 aa24.93■■□□□ 1.58
SSPN-204ENST00000535504 SYN1P17600 705 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 ARHGAP4P98171 946 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 FAM47CQ5HY64 1035 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 MYSM1Q5VVJ2 828 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 METTL7BQ6UX53 244 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 ANKRD33Q7Z3H0 272 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 BLIDQ8IZY5 108 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 MXRA8Q9BRK3 442 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 SDF4Q9BRK5 362 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 TMEM39AQ9NV64 488 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 UBIAD1Q9Y5Z9 338 aa24.92■■□□□ 1.58
SSPN-204ENST00000535504 MKI67P46013 3256 aaKnown RBP24.92■■□□□ 1.58
SSPN-204ENST00000535504 MYH7BA7E2Y1 1941 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 SORBS3O60504 671 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 PPFIA4O75335 1185 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 MCM2P49736 904 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 CEP55Q53EZ4 464 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 CYFIP1Q7L576 1253 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 TBC1D32Q96NH3 1257 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 ALG1Q9BT22 464 aa24.91■■□□□ 1.58
SSPN-204ENST00000535504 TNRC18O15417 2968 aaPredicted RBP24.91■■□□□ 1.58
SSPN-204ENST00000535504 SUPT20HL2P0C7V6 817 aa24.9■■□□□ 1.58
SSPN-204ENST00000535504 SETQ01105 290 aaPredicted RBP24.9■■□□□ 1.58
SSPN-204ENST00000535504 CEP290O15078 2479 aa24.9■■□□□ 1.58
SSPN-204ENST00000535504 LARGE1O95461 756 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 ITGB5P18084 799 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 PSMC6P62333 389 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 NIPA1Q7RTP0 329 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 KRT25Q7Z3Z0 450 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 CCDC83Q8IWF9 413 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 DAGLBQ8NCG7 672 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 KIF2CQ99661 725 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 LLPHQ9BRT6 129 aaKnown RBP24.89■■□□□ 1.58
SSPN-204ENST00000535504 BACH2Q9BYV9 841 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 NOD1Q9Y239 953 aa24.89■■□□□ 1.58
SSPN-204ENST00000535504 CCDC194A0A1B0GVG4 234 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 RAG1P15918 1043 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 HMGN5P82970 282 aaKnown RBP24.88■■□□□ 1.57
SSPN-204ENST00000535504 SP2Q02086 613 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 PTPN11Q06124 597 aaPredicted RBP24.88■■□□□ 1.57
SSPN-204ENST00000535504 NFRKBQ6P4R8 1299 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 FAM184AQ8NB25 1140 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 NSUN7Q8NE18 718 aaKnown RBP24.88■■□□□ 1.57
SSPN-204ENST00000535504 RASGRP4Q8TDF6 673 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 PKD2L1Q9P0L9 805 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 ZNF215Q9UL58 517 aaPredicted RBP24.88■■□□□ 1.57
SSPN-204ENST00000535504 KIF3AQ9Y496 699 aa24.88■■□□□ 1.57
SSPN-204ENST00000535504 CYP3A4P08684 503 aa24.87■■□□□ 1.57
SSPN-204ENST00000535504 CDK7P50613 346 aa24.87■■□□□ 1.57
SSPN-204ENST00000535504 SP4Q02446 784 aa24.87■■□□□ 1.57
SSPN-204ENST00000535504 CHRDL2Q6WN34 429 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms