RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 KCNK3O14649 394 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 SLC9A1P19634 815 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 DHTKD1Q96HY7 919 aaPredicted RBP15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 STIM2Q9P246 746 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 KIAA1024Q9UPX6 916 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 JRKLQ9Y4A0 524 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 PCDHAC2Q9Y5I4 1007 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 TIAM2Q8IVF5 1701 aa15.36■□□□□ 0.05
LPCAT3-203ENST00000535479 ZNF233A6NK53 670 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 MAGEA9P43362 315 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 KCNA1Q09470 495 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 BAP1Q92560 729 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 CELF4Q9BZC1 486 aaKnown RBP15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 CLIC2O15247 247 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 DPH5Q9H2P9 285 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 CAPN7Q9Y6W3 813 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
LPCAT3-203ENST00000535479 HGSO14964 777 aaPredicted RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 FGRP09769 529 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 ITGA4P13612 1032 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 PAFAH1B1P43034 410 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 RCAN1P53805 252 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 KCNB1Q14721 858 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 TRIM58Q8NG06 486 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 RTCBQ9Y3I0 505 aaKnown RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 RAD51CO43502 376 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 HSF2BPO75031 334 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 KRT18P05783 430 aaKnown RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 PSMC6P62333 389 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 PLS1Q14651 629 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 HERC4Q5GLZ8 1057 aaPredicted RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 POTEEQ6S8J3 1075 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 AJAP1Q9UKB5 411 aaPredicted RBP15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 DISP2A7MBM2 1401 aa15.34■□□□□ 0.05
LPCAT3-203ENST00000535479 BICDL2A1A5D9 508 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 CEP104O60308 925 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 AKR1B1P15121 316 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 UBAP2Q5T6F2 1119 aaKnown RBP15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 HGSNATQ68CP4 663 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 ALS2CR12Q96Q35 445 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 NEUROG2Q9H2A3 272 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 C6orf50Q9HD87 102 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.05
LPCAT3-203ENST00000535479 EBAG9O00559 213 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 NOL4O94818 638 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 HDLBPQ00341 1268 aaKnown RBP15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 SPRED3Q2MJR0 410 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 CNNM4Q6P4Q7 775 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 DOCK2Q92608 1830 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 RSPH10B2B2RC85 870 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 H0YHG0 523 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 ZBTB39O15060 712 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 ERLIN2O94905 339 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 RSPH10BP0C881 870 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 EPS15P42566 896 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 TCP10Q12799 353 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 CFAP58Q5T655 872 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 BMP2KQ9NSY1 1161 aaPredicted RBP15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
LPCAT3-203ENST00000535479 USP17L10C9JJH3 530 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 ABCB4P21439 1286 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 POLD1P28340 1107 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 UBXN2AP68543 259 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 DHX9Q08211 1270 aaKnown RBP15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 COASYQ13057 564 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 PABPC4Q13310 644 aaKnown RBP eCLIP15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 USH1GQ495M9 461 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 AADACL2Q6P093 401 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 PDXDC1Q6P996 788 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 TSPYL1Q9H0U9 437 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 UFL1O94874 794 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 MNAT1P51948 309 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 IFT88Q13099 833 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 MAN2A1Q16706 1144 aa15.32■□□□□ 0.04
LPCAT3-203ENST00000535479 DGKHQ86XP1 1220 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms