RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PMF1-BGLAPU3KQ54 211 aa7.74□□□□□ -1.17
PRKDC-205ENST00000535375 AQP7O14520 342 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 CYP2C8P10632 490 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 GRK2P25098 689 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 GRK3P35626 688 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 SPIRE1Q08AE8 756 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 BMS1Q14692 1282 aaKnown RBP7.73□□□□□ -1.17
PRKDC-205ENST00000535375 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 LCNL1Q6ZST4 164 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 MAMDC2Q7Z304 686 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-205ENST00000535375 SMARCC2Q8TAQ2 1214 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRKDC-205ENST00000535375 PTPRN2Q92932 1015 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 MRFAP1L1Q96HT8 127 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 KCNJ15Q99712 375 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 PCDH18Q9HCL0 1135 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 PPARGC1AQ9UBK2 798 aaKnown RBP7.73□□□□□ -1.17
PRKDC-205ENST00000535375 ZNF652Q9Y2D9 606 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 TRAF6Q9Y4K3 522 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 PCDHB4Q9Y5E5 795 aa7.73□□□□□ -1.17
PRKDC-205ENST00000535375 FAM47E-STBD1D6RA91 191 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 SOD2P04179 222 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 GNAT1P11488 350 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 GABREP78334 506 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 MTDHQ86UE4 582 aaKnown RBP7.72□□□□□ -1.17
PRKDC-205ENST00000535375 ZSWIM4Q9H7M6 989 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 NGRNQ9NPE2 291 aaKnown RBP7.72□□□□□ -1.17
PRKDC-205ENST00000535375 CDK11AQ9UQ88 783 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-205ENST00000535375 MRPS23Q9Y3D9 190 aaKnown RBP7.72□□□□□ -1.17
PRKDC-205ENST00000535375 NUB1Q9Y5A7 615 aa7.72□□□□□ -1.17
PRKDC-205ENST00000535375 NAT1P18440 290 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 TRIM48Q8IWZ4 208 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 ZSWIM2Q8NEG5 633 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 PHOSPHO1Q8TCT1 267 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 THAP3Q8WTV1 239 aaPredicted RBP7.71□□□□□ -1.18
PRKDC-205ENST00000535375 EXOC2Q96KP1 924 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 SMOC1Q9H4F8 434 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 MYOTQ9UBF9 498 aa7.71□□□□□ -1.18
PRKDC-205ENST00000535375 ASXL2Q76L83 1435 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 TADA3O75528 432 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 COL6A2P12110 1019 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 GUCY1A3Q02108 690 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 PAK1Q13153 545 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 VMACQ2NL98 169 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 EMC4Q5J8M3 183 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 FAM126BQ8IXS8 530 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 PIP4K2CQ8TBX8 421 aa7.7□□□□□ -1.18
PRKDC-205ENST00000535375 CCDC163A0A0D9SF12 145 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 BMP7P18075 431 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 NKX3-2P78367 333 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 LINC01356Q8N9X3 169 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 FNIP1Q8TF40 1166 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 TOE1Q96GM8 510 aaKnown RBP7.69□□□□□ -1.18
PRKDC-205ENST00000535375 IPPKQ9H8X2 491 aa7.69□□□□□ -1.18
PRKDC-205ENST00000535375 TCRBV5S2A0A599 114 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 SMARCA5O60264 1052 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-205ENST00000535375 C8BP07358 591 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 STAT5AP42229 794 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 CCDC144BQ3MJ40 725 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 OTOP3Q7RTS5 596 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 LILRB2Q8N423 598 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 FAM26EQ8N5C1 309 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 ARRDC4Q8NCT1 418 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 ZBTB8AQ96BR9 441 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 LNPKQ9C0E8 428 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 ZCCHC4Q9H5U6 513 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 PCDHA8Q9Y5H6 950 aa7.68□□□□□ -1.18
PRKDC-205ENST00000535375 SLC27A2O14975 620 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 EFCAB14O75071 495 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 SASH1O94885 1247 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
PRKDC-205ENST00000535375 C6orf222P0C671 652 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-205ENST00000535375 CAP1Q01518 475 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 TTLL7Q6ZT98 887 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 EP400NLQ6ZTU2 488 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 KISS1RQ969F8 398 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-205ENST00000535375 NDOR1Q9UHB4 597 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 DSEQ9UL01 958 aa7.67□□□□□ -1.18
PRKDC-205ENST00000535375 FFAR3O14843 346 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 GSTA4O15217 222 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 SRGAP2CP0DJJ0 459 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 ST5P78524 1137 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 SMAD4Q13485 552 aaKnown RBP7.66□□□□□ -1.18
PRKDC-205ENST00000535375 ZC3H7AQ8IWR0 971 aaKnown RBP7.66□□□□□ -1.18
PRKDC-205ENST00000535375 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 NOX5Q96PH1 765 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 CATSPERZQ9NTU4 200 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 DTLQ9NZJ0 730 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 ASH2LQ9UBL3 628 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 PCDHA9Q9Y5H5 950 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 PTCH2Q9Y6C5 1203 aa7.66□□□□□ -1.18
PRKDC-205ENST00000535375 HTRA3P83110 453 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 GRIN1Q05586 938 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 SAPCD2Q86UD0 394 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms