RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PDE4DQ08499 809 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 PWP2Q15269 919 aaKnown RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 SBK1Q52WX2 424 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 PLEKHG4Q58EX7 1191 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 CCDC62Q6P9F0 684 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 SLC30A10Q6XR72 485 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 RASGRP2Q7LDG7 609 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 TMEM57Q8N5G2 664 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 TMEM105Q8N8V8 129 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 GMCL1Q96IK5 515 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 RIPOR3Q96MK2 946 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 ALG1Q9BT22 464 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 C11orf84Q9BUA3 381 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 PHF7Q9BWX1 381 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
CLIP1-206ENST00000535290 LMAN2LQ9H0V9 348 aa9.85□□□□□ -0.83
CLIP1-206ENST00000535290 DMDP11532 3685 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 MICAL3Q7RTP6 2002 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 RSPH10B2B2RC85 870 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 PLA2G6O60733 806 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 ICAM1P05362 532 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 RSPH10BP0C881 870 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 CALML3P27482 149 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 THPOP40225 353 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 PSEN2P49810 448 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 ARHGAP1Q07960 439 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 COASYQ13057 564 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 PTPN21Q16825 1174 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 LY6KQ17RY6 165 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 CHST3Q7LGC8 479 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 DGLUCYQ7Z3D6 616 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 ADGRD2Q7Z7M1 963 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 ZNF444Q8N0Y2 327 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-206ENST00000535290 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 FRAT1Q92837 279 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-206ENST00000535290 IL17RAQ96F46 866 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 PAG1Q9NWQ8 432 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 LCTP09848 1927 aa9.84□□□□□ -0.83
CLIP1-206ENST00000535290 EMSYQ7Z589 1322 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 GSG1L2A8MUP6 293 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 IPO8O15397 1037 aaKnown RBP9.83□□□□□ -0.84
CLIP1-206ENST00000535290 GLP2RO95838 553 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 MMP1P03956 469 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 CASTP20810 708 aaKnown RBP9.83□□□□□ -0.84
CLIP1-206ENST00000535290 UBE3CQ15386 1083 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 RCSD1Q6JBY9 416 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 EFHBQ8N7U6 833 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 CLEC4DQ8WXI8 215 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 SEPT8Q92599 483 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 STRBPQ96SI9 672 aaKnown RBP9.83□□□□□ -0.84
CLIP1-206ENST00000535290 BOLA2Q9H3K6 86 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 BARX2Q9UMQ3 279 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-206ENST00000535290 ATRXP46100 2492 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 BAHCC1Q9P281 2608 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 ZNF292O60281 2723 aa9.83□□□□□ -0.84
CLIP1-206ENST00000535290 HAS3O00219 553 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 ANP32CO43423 234 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 GH1P01241 217 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 ZNF286BP0CG31 522 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 DNAJB1P25685 340 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 RPS6P62753 249 aaKnown RBP9.82□□□□□ -0.84
CLIP1-206ENST00000535290 MFSD10Q14728 455 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 KIAA0753Q2KHM9 967 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 RNF207Q6ZRF8 634 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 SEPT14Q6ZU15 432 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 RHPN1Q8TCX5 695 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLIP1-206ENST00000535290 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 RANBP17Q9H2T7 1088 aaKnown RBP9.82□□□□□ -0.84
CLIP1-206ENST00000535290 PLAGL2Q9UPG8 496 aa9.82□□□□□ -0.84
CLIP1-206ENST00000535290 F2P00734 622 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 TSPY3P0CV98 308 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 TSPY8P0CW00 308 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 SLC16A2P36021 539 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 NRIP1P48552 1158 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 RBM10P98175 930 aaKnown RBP9.81□□□□□ -0.84
CLIP1-206ENST00000535290 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 DGKDQ16760 1214 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 MCTP2Q6DN12 878 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 TTBK2Q6IQ55 1244 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
CLIP1-206ENST00000535290 SERINC5Q86VE9 423 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 DHX37Q8IY37 1157 aaKnown RBP9.81□□□□□ -0.84
CLIP1-206ENST00000535290 SUSD6Q92537 303 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 CLP1Q92989 425 aaKnown RBP9.81□□□□□ -0.84
CLIP1-206ENST00000535290 EPB41L4AQ9HCS5 686 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-206ENST00000535290 MTMR7Q9Y216 660 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 PCDHGC5Q9Y5F6 944 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 DNAH14Q0VDD8 3507 aa9.81□□□□□ -0.84
CLIP1-206ENST00000535290 VPS13AQ96RL7 3174 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 CHD6Q8TD26 2715 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 PLIN4Q96Q06 1357 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 CTSHP09668 335 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ARP10275 920 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ATF7P17544 494 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-206ENST00000535290 SP100P23497 879 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-206ENST00000535290 CEP85Q6P2H3 762 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms