RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 RPS6KA4O75676 772 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
SMPD1-210ENST00000534405 PNMA1Q8ND90 353 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 HDAC7Q8WUI4 952 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 TBC1D31Q96DN5 1066 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 USP17L3A6NCW0 530 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 USP17L4A6NCW7 530 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 GNPATO15228 680 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 RIPK1Q13546 671 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 USP17L1Q7RTZ2 530 aa21.12■□□□□ 0.97
SMPD1-210ENST00000534405 SH3RF3Q8TEJ3 882 aaPredicted RBP21.12■□□□□ 0.97
SMPD1-210ENST00000534405 ZNF233A6NK53 670 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 GTPBP6O43824 516 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-210ENST00000534405 KIF5BP33176 963 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 KRT31Q15323 416 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 EZH2Q15910 746 aaKnown RBP21.11■□□□□ 0.97
SMPD1-210ENST00000534405 CCDC181Q5TID7 509 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 CWF19L1Q69YN2 538 aaKnown RBP21.11■□□□□ 0.97
SMPD1-210ENST00000534405 SLC30A9Q6PML9 568 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 LRRC1Q9BTT6 524 aa21.11■□□□□ 0.97
SMPD1-210ENST00000534405 RGL2O15211 777 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 ZNF185O15231 689 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 TRIM14Q14142 442 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 DIXDC1Q155Q3 683 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 SLC44A5Q8NCS7 719 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 POLD4Q9HCU8 107 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMPD1-210ENST00000534405 GDAQ9Y2T3 454 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 PCDHGC5Q9Y5F6 944 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 M0R2N6 131 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 ANP32DO95626 131 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 ITGB3BPQ13352 177 aaPredicted RBP21.1■□□□□ 0.97
SMPD1-210ENST00000534405 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 TPTE2Q6XPS3 522 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 KDM4CQ9H3R0 1056 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 BAIAP2L1Q9UHR4 511 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 MAD2L2Q9UI95 211 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 PCDHA4Q9UN74 947 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 MAPK8IP1Q9UQF2 711 aa21.1■□□□□ 0.97
SMPD1-210ENST00000534405 TNRC6CQ9HCJ0 1690 aaKnown RBP21.1■□□□□ 0.97
SMPD1-210ENST00000534405 GMNCA6NCL1 334 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 C5orf60A6NFR6 353 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 HMGB1P1B2RPK0 211 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-210ENST00000534405 RNF225M0QZC1 329 aaPredicted RBP21.09■□□□□ 0.97
SMPD1-210ENST00000534405 CYTH3O43739 400 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 ZPR1O75312 459 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 DGKHQ86XP1 1220 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 ATP6V1G3Q96LB4 118 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 ZNF570Q96NI8 536 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 RWDD2AQ9UIY3 292 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 PP2D1A8MPX8 630 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 CCDC122Q5T0U0 273 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
SMPD1-210ENST00000534405 YIPF3Q9GZM5 350 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 LIMA1Q9UHB6 759 aaKnown RBP21.09■□□□□ 0.97
SMPD1-210ENST00000534405 MTMR7Q9Y216 660 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 LEMD3Q9Y2U8 911 aa21.09■□□□□ 0.97
SMPD1-210ENST00000534405 A6NHS1 94 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 RPN1P04843 607 aaKnown RBP21.08■□□□□ 0.97
SMPD1-210ENST00000534405 CALML3P27482 149 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 PAK1Q13153 545 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 GRM4Q14833 912 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 NAALADL2Q58DX5 795 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 CFAP58Q5T655 872 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 RC3H1Q5TC82 1133 aaKnown RBP21.08■□□□□ 0.97
SMPD1-210ENST00000534405 NELFBQ8WX92 580 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 GPR101Q96P66 508 aaPredicted RBP21.08■□□□□ 0.97
SMPD1-210ENST00000534405 HINFPQ9BQA5 517 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 VPS16Q9H269 839 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 TMEM60Q9H2L4 133 aa21.08■□□□□ 0.97
SMPD1-210ENST00000534405 LRRC10BA6NIK2 292 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 LONP1P36776 959 aaKnown RBP21.08■□□□□ 0.96
SMPD1-210ENST00000534405 HERVK_113P62684 666 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 BLMHQ13867 455 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 BYSLQ13895 437 aaKnown RBP21.08■□□□□ 0.96
SMPD1-210ENST00000534405 ZNF658Q5TYW1 1059 aaPredicted RBP21.08■□□□□ 0.96
SMPD1-210ENST00000534405 FNBP4Q8N3X1 1017 aaPredicted RBP21.08■□□□□ 0.96
SMPD1-210ENST00000534405 CCT6BQ92526 530 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 ANKS1AQ92625 1134 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 SEC16BQ96JE7 1060 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 CHP1Q99653 195 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 TAB2Q9NYJ8 693 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 SBF2Q86WG5 1849 aa21.08■□□□□ 0.96
SMPD1-210ENST00000534405 LDHBP07195 334 aaKnown RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 LINGO3P0C6S8 592 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 FERP16591 822 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 PRCPP42785 496 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 NFIXQ14938 502 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 TRIM74Q86UV6 250 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 TRIM73Q86UV7 250 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 CREG2Q8IUH2 290 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 ARHGEF1Q92888 912 aaKnown RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 HVCN1Q96D96 273 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 L3MBTL3Q96JM7 780 aaPredicted RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 NUP88Q99567 741 aaPredicted RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 PPANQ9NQ55 473 aaKnown RBP21.07■□□□□ 0.96
SMPD1-210ENST00000534405 SH3GLB2Q9NR46 395 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 STIM2Q9P246 746 aa21.07■□□□□ 0.96
SMPD1-210ENST00000534405 PCDHA6Q9UN73 950 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms