RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 NKRFO15226 690 aaKnown RBP eCLIP15.32■□□□□ 0.04
CMTM1-219ENST00000533953 PQBP1O60828 265 aaKnown RBP15.32■□□□□ 0.04
CMTM1-219ENST00000533953 SP4Q02446 784 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 SH3RF1Q7Z6J0 888 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 UBIAD1Q9Y5Z9 338 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 EDIL3O43854 480 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 CDKL5O76039 1030 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
CMTM1-219ENST00000533953 ARP10275 920 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 PURAQ00577 322 aaKnown RBP15.31■□□□□ 0.04
CMTM1-219ENST00000533953 RABEP1Q15276 862 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 NPY5RQ15761 445 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 CELF3Q5SZQ8 465 aaKnown RBP15.31■□□□□ 0.04
CMTM1-219ENST00000533953 MYSM1Q5VVJ2 828 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 CYFIP1Q7L576 1253 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
CMTM1-219ENST00000533953 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
CMTM1-219ENST00000533953 FIBPO43427 364 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ZEB2O60315 1214 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 MMP3P08254 477 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 GNA11P29992 359 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ICAM3P32942 547 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 SREBF1P36956 1147 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 CPT1AP50416 773 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 CDK7P50613 346 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ARHGAP4P98171 946 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 SNX17Q15036 470 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 XRRA1Q6P2D8 792 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
CMTM1-219ENST00000533953 SPATA33Q96N06 139 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 MXRA8Q9BRK3 442 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ALG1Q9BT22 464 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 MLXIPQ9HAP2 919 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 PRDM5Q9NQX1 630 aaPredicted RBP15.3■□□□□ 0.04
CMTM1-219ENST00000533953 SH3GLB2Q9NR46 395 aa15.3■□□□□ 0.04
CMTM1-219ENST00000533953 ELP1O95163 1332 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 FAM86B1E9PN63 330 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 ARVCFO00192 962 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 FAM86B2P0C5J1 330 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 ZNF286BP0CG31 522 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 ZNF76P36508 570 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 AP3B2Q13367 1082 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 GNPTABQ3T906 1256 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
CMTM1-219ENST00000533953 BLIDQ8IZY5 108 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 CCDC148Q8NFR7 591 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
CMTM1-219ENST00000533953 GLT8D2Q9H1C3 349 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
CMTM1-219ENST00000533953 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-219ENST00000533953 STAM2O75886 525 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 TGFB3P10600 412 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 KCNA2P16389 499 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 ITGB8P26012 769 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 GUCY1B3Q02153 619 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 MTMR1Q13613 665 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 KAT2BQ92831 832 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 GPRASP2Q96D09 838 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-219ENST00000533953 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-219ENST00000533953 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 KCNH7Q9NS40 1196 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 POLR3EQ9NVU0 708 aa15.28■□□□□ 0.04
CMTM1-219ENST00000533953 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 M0R2N6 131 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 MEIS1O00470 390 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-219ENST00000533953 FAAP100Q0VG06 881 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 CEP55Q53EZ4 464 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 BRDTQ58F21 947 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-219ENST00000533953 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 EARS2Q5JPH6 523 aaKnown RBP15.27■□□□□ 0.04
CMTM1-219ENST00000533953 C1orf53Q5VUE5 145 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
CMTM1-219ENST00000533953 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-219ENST00000533953 CEP290O15078 2479 aa15.27■□□□□ 0.03
CMTM1-219ENST00000533953 DDX39AO00148 427 aaKnown RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 CABYRO75952 493 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 CYP3A4P08684 503 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 NEDD9Q14511 834 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms