RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHKA-208ENST00000533910 STK10O94804 968 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 MBD4O95243 580 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 F13A1P00488 732 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 FGAP02671 866 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 HSP90AA1P07900 732 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 GNAT2P19087 354 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 BMP6P22004 513 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ALDH1B1P30837 517 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 LMNB2Q03252 620 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 PTPN11Q06124 597 aaPredicted RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 RBL2Q08999 1139 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 PWP1Q13610 501 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 TOB2Q14106 344 aaPredicted RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 ANKRD1Q15327 319 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 IMMTQ16891 758 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 TTLL5Q6EMB2 1281 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 AGMOQ6ZNB7 445 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ADGRA1Q86SQ6 560 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 FBXL16Q8N461 479 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ZGPATQ8N5A5 531 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 TBC1D16Q8TBP0 767 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 NSUN4Q96CB9 384 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 ZSCAN31Q96LW9 406 aaPredicted RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 NEK1Q96PY6 1258 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 RIOK1Q9BRS2 568 aaKnown RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 AGXT2Q9BYV1 514 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ZNF408Q9H9D4 720 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 EPB41L4AQ9HCS5 686 aaPredicted RBP6.7□□□□□ -1.34
CHKA-208ENST00000533910 TMEM39AQ9NV64 488 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 LRP2BPQ9P2M1 347 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 POLLQ9UGP5 575 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 SOX13Q9UN79 622 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ECM29Q5VYK3 1845 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 WDR19Q8NEZ3 1342 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 ADAMTSL1Q8N6G6 1762 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 SCN9AQ15858 1988 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 GSG1L2A8MUP6 293 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 E7EWF7 191 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 MAFGO15525 162 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 LARGE1O95461 756 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
CHKA-208ENST00000533910 ARAFP10398 606 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 EPHA1P21709 976 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 CYP7A1P22680 504 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 EXOSC10Q01780 885 aaKnown RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 ST3GAL1Q11201 340 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 NFKBIBQ15653 356 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 SEZ6Q53EL9 994 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 NAA16Q6N069 864 aaPredicted RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 PSAPL1Q6NUJ1 521 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 CLEC17AQ6ZS10 378 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 C1orf229Q6ZS94 237 aaPredicted RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 C8orf86Q6ZUL3 223 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 C2CD5Q86YS7 1000 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 TBC1D10CQ8IV04 446 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 MB21D2Q8IYB1 491 aaPredicted RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 EXOC8Q8IYI6 725 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 WDR66Q8TBY9 1149 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 ARMC5Q96C12 935 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 CLEC4MQ9H2X3 399 aaPredicted RBP6.69□□□□□ -1.34
CHKA-208ENST00000533910 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 CBX8Q9HC52 389 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 CD209Q9NNX6 404 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 RAI14Q9P0K7 980 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 ABCF2Q9UG63 623 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 TPCN1Q9ULQ1 816 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 PPT2Q9UMR5 302 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 FAM205AQ6ZU69 1335 aa6.69□□□□□ -1.34
CHKA-208ENST00000533910 MYH15Q9Y2K3 1946 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 ECEL1O95672 775 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 PRDX5P30044 214 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 CDK8P49336 464 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 EVCP57679 992 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 NUCB2P80303 420 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 MECOMQ03112 1051 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 APOBRQ0VD83 1088 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 CHAF1AQ13111 956 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 BMS1Q14692 1282 aaKnown RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 ME3Q16798 604 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 SOGA3Q5TF21 947 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 SPTY2D1Q68D10 685 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 NOL8Q76FK4 1167 aaKnown RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 SULF2Q8IWU5 870 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 MIGA1Q8NAN2 632 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 TNFRSF25Q93038 417 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 NKD1Q969G9 470 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 TCEANC2Q96MN5 208 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 GPR101Q96P66 508 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 NT5C1AQ9BXI3 368 aa6.68□□□□□ -1.34
CHKA-208ENST00000533910 RTFDC1Q9BY42 306 aaPredicted RBP6.68□□□□□ -1.34
CHKA-208ENST00000533910 PDGFDQ9GZP0 370 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms