RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ATXN2LQ8WWM7 1075 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 RFFLQ8WZ73 363 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SYMPKQ92797 1274 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 N4BP2L2Q92802 583 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 MMS19Q96T76 1030 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 FMO2Q99518 471 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 JPH2Q9BR39 696 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 IMPG2Q9BZV3 1241 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PRR36Q9H6K5 1346 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 BCORL1Q5H9F3 1711 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TTC26A0AVF1 554 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 FAM177BA6PVY3 158 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 MINDY4BA8MYZ0 360 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 I3L4J1 428 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 EIF2S1P05198 315 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 MYL6BP14649 208 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 HPDP32754 393 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 GGCXP38435 758 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 MFN1Q8IWA4 741 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SLFN12Q8IYM2 578 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 ST13P4Q8IZP2 240 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 SNX29Q8TEQ0 813 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SAMSN1Q9NSI8 373 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 UVRAGQ9P2Y5 699 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TTC7AQ9ULT0 858 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 SLIT1O75093 1534 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 GTPBP10A4D1E9 387 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 CCT8L1PA6NM43 557 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 B4E1Z4 1266 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TMEM253P0C7T8 217 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 LSP1P33241 339 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 XIAPP98170 497 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 ASPHQ12797 758 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 CUL4BQ13620 913 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 MOXD1Q6UVY6 613 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 STK11IPQ8N1F8 1099 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TTC13Q8NBP0 860 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 MPHOSPH6Q99547 160 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 CCDC68Q9H2F9 335 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 NHEJ1Q9H9Q4 299 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 HOMER2Q9NSB8 354 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 ABCF2Q9UG63 623 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PDXKO00764 312 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 SPOPO43791 374 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 SLC18A3Q16572 532 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 LRRC31Q6UY01 552 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZCRB1Q8TBF4 217 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 KDM4CQ9H3R0 1056 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 GOLPH3LQ9H4A5 285 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZCCHC17Q9NP64 241 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 TMOD2Q9NZR1 351 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ANAPC4Q9UJX5 808 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 PCDHA4Q9UN74 947 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 TULP4Q9NRJ4 1543 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ABCA9Q8IUA7 1624 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 CCDC22O60826 627 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 EIF4A3P38919 411 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 CCT6AP40227 531 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 USP11P51784 963 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 TAF11Q15544 211 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 CCDC14Q49A88 953 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 LACTB2Q53H82 288 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZNF589Q86UQ0 364 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 SPATA5Q8NB90 893 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 LARP6Q9BRS8 491 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZBTB3Q9H5J0 574 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 KCND2Q9NZV8 630 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 SUCLA2Q9P2R7 463 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 DDX25Q9UHL0 483 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 SORCS3Q9UPU3 1222 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 IRS4O14654 1257 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 NEBLO76041 1014 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 PAEPP09466 180 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 NUDT17P0C025 328 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 DPYDQ12882 1025 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 MYO1EQ12965 1108 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 DBN1Q16643 649 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 GSTA3Q16772 222 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 MUM1Q2TAK8 710 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 DNAL1Q4LDG9 190 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 HERC4Q5GLZ8 1057 aaPredicted RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 ENOSF1Q7L5Y1 443 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 AFAP1L2Q8N4X5 818 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZNF473Q8WTR7 871 aaKnown RBP4.4□□□□□ -1.7
SOX6-217ENST00000533870 INPP5DQ92835 1189 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 TSNARE1Q96NA8 513 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 NYXQ9GZU5 481 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 TBC1D7Q9P0N9 293 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 ZFATQ9P243 1243 aa4.4□□□□□ -1.7
SOX6-217ENST00000533870 UBE4BO95155 1302 aa4.4□□□□□ -1.71
SOX6-217ENST00000533870 MAPK13O15264 365 aa4.4□□□□□ -1.71
SOX6-217ENST00000533870 ASAP2O43150 1006 aa4.4□□□□□ -1.71
SOX6-217ENST00000533870 PHKG2P15735 406 aa4.4□□□□□ -1.71
SOX6-217ENST00000533870 TSHRP16473 764 aa4.4□□□□□ -1.71
SOX6-217ENST00000533870 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
SOX6-217ENST00000533870 NAA30Q147X3 362 aaPredicted RBP4.4□□□□□ -1.71
SOX6-217ENST00000533870 FAM83BQ5T0W9 1011 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms