RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.37■■□□□ 1.01
CAPN1-226ENST00000533820 NYXQ9GZU5 481 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 SCP2P22307 547 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 CCT5P48643 541 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 FGFBP2Q9BYJ0 223 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 ECM1Q16610 540 aa21.36■■□□□ 1.01
CAPN1-226ENST00000533820 FNBP4Q8N3X1 1017 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-226ENST00000533820 SPZ1Q9BXG8 430 aa21.36■■□□□ 1.01
CAPN1-226ENST00000533820 CASZ1Q86V15 1759 aa21.36■■□□□ 1.01
CAPN1-226ENST00000533820 F8W031 263 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-226ENST00000533820 SLURP2P0DP57 97 aa21.36■■□□□ 1.01
CAPN1-226ENST00000533820 MAP2K1Q02750 393 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-226ENST00000533820 UNC13DQ70J99 1090 aa21.36■■□□□ 1.01
CAPN1-226ENST00000533820 AENQ8WTP8 325 aaKnown RBP21.36■■□□□ 1.01
CAPN1-226ENST00000533820 SH2D3CQ8N5H7 860 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 ARL8AQ96BM9 186 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 MAGEF1Q9HAY2 307 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 HYOU1Q9Y4L1 999 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 NPHP3-ACAD11A0A0J9YXS1 232 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 A0A1W2PQJ5 194 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 SLC16A2P36021 539 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 PAFAH1B1P43034 410 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 POLR2FP61218 127 aaKnown RBP21.35■■□□□ 1.01
CAPN1-226ENST00000533820 C8orf74Q6P047 294 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 TMEM266Q2M3C6 531 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 KRT79Q5XKE5 535 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 ZNF662Q6ZS27 426 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-226ENST00000533820 TLR10Q9BXR5 811 aa21.35■■□□□ 1.01
CAPN1-226ENST00000533820 PPFIA4O75335 1185 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 ATP1A2P50993 1020 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 GUCY2FP51841 1108 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 PROCA1Q8NCQ7 364 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-226ENST00000533820 BAP1Q92560 729 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 RTFDC1Q9BY42 306 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-226ENST00000533820 NARFQ9UHQ1 456 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 FIGNQ5HY92 759 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 HAUS3Q68CZ6 603 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 CCDC84Q86UT8 332 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-226ENST00000533820 RUFY1Q96T51 708 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 GOLPH3Q9H4A6 298 aa21.34■■□□□ 1.01
CAPN1-226ENST00000533820 GSTO1P78417 241 aa21.33■■□□□ 1.01
CAPN1-226ENST00000533820 KCNMA1Q12791 1236 aa21.33■■□□□ 1.01
CAPN1-226ENST00000533820 SUGP1Q8IWZ8 645 aaKnown RBP21.33■■□□□ 1.01
CAPN1-226ENST00000533820 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
CAPN1-226ENST00000533820 KRT14P02533 472 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 ADCY7P51828 1080 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 RAPGEF1Q13905 1077 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 TRADDQ15628 312 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 SWT1Q5T5J6 900 aaKnown RBP21.33■■□□□ 1
CAPN1-226ENST00000533820 LRRC55Q6ZSA7 311 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 MMGT1Q8N4V1 131 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 MTMR9Q96QG7 549 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 LSM14BQ9BX40 385 aaKnown RBP21.33■■□□□ 1
CAPN1-226ENST00000533820 STIM2Q9P246 746 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 NFU1Q9UMS0 254 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 SAMM50Q9Y512 469 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 LAMB1P07942 1786 aa21.33■■□□□ 1
CAPN1-226ENST00000533820 EDIL3O43854 480 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 RPS6KA5O75582 802 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 IRAK1P51617 712 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 GNGT1P63211 74 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 CEP120Q8N960 986 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 NEDD1Q8NHV4 660 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 RAD54LQ92698 747 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 UFL1O94874 794 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 LDHCP07864 332 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 CARSP49589 748 aaKnown RBP21.32■■□□□ 1
CAPN1-226ENST00000533820 CDK17Q00537 523 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 KLHDC7AQ5VTJ3 777 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 PDXDC1Q6P996 788 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 GUF1Q8N442 669 aaKnown RBP21.32■■□□□ 1
CAPN1-226ENST00000533820 TBC1D5Q92609 795 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 CALR3Q96L12 384 aaKnown RBP21.32■■□□□ 1
CAPN1-226ENST00000533820 NOX5Q96PH1 765 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 PACSIN1Q9BY11 444 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 MYH1P12882 1939 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 E9PMD0 336 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 PALMO75781 387 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 GLI1P08151 1106 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 FAM153BP0C7A2 387 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 TCP1P17987 556 aaKnown RBP21.32■■□□□ 1
CAPN1-226ENST00000533820 GUCY2DQ02846 1103 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 FAM153CQ494X1 144 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 ZNF804AQ7Z570 1209 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 BCAS4Q8TDM0 211 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 ARHGEF1Q92888 912 aaKnown RBP21.32■■□□□ 1
CAPN1-226ENST00000533820 TSG101Q99816 390 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 FAM153AQ9UHL3 310 aa21.32■■□□□ 1
CAPN1-226ENST00000533820 CORO7P57737 925 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 EHHADHQ08426 723 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 MFSD14BQ5SR56 506 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 ZNF287Q9HBT7 754 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 ADAMTS1Q9UHI8 967 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
CAPN1-226ENST00000533820 TLR2O60603 784 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 PDHBP11177 359 aa21.31■■□□□ 1
CAPN1-226ENST00000533820 HNRNPH3P31942 346 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms