RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 PPTC7Q8NI37 304 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 AFG1LQ8WV93 481 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
TSKU-204ENST00000533752 SH3GLB2Q9NR46 395 aa18.13■□□□□ 0.49
TSKU-204ENST00000533752 A0A1W2PPC1 479 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 PFKFB2O60825 505 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 GGPS1O95749 300 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 NEK4P51957 841 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 NEDD9Q14511 834 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 DGKDQ16760 1214 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 CELF3Q5SZQ8 465 aaKnown RBP18.12■□□□□ 0.49
TSKU-204ENST00000533752 REXO1Q8N1G1 1221 aaKnown RBP18.12■□□□□ 0.49
TSKU-204ENST00000533752 GIMAP8Q8ND71 665 aaPredicted RBP18.12■□□□□ 0.49
TSKU-204ENST00000533752 GPRASP2Q96D09 838 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 LARP6Q9BRS8 491 aaKnown RBP18.12■□□□□ 0.49
TSKU-204ENST00000533752 ANO3Q9BYT9 981 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 TPCN1Q9ULQ1 816 aa18.12■□□□□ 0.49
TSKU-204ENST00000533752 SPATA31C2B4DYI2 1134 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 BMP8BP34820 402 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 MAGEA10P43363 369 aaPredicted RBP18.11■□□□□ 0.49
TSKU-204ENST00000533752 CLK2P49760 499 aaKnown RBP18.11■□□□□ 0.49
TSKU-204ENST00000533752 MYSM1Q5VVJ2 828 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 FAM126BQ8IXS8 530 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 GDF15Q99988 308 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 SENP7Q9BQF6 1050 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 PRO3102Q9H379 93 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 TMEM39AQ9NV64 488 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 RTEL1Q9NZ71 1219 aa18.11■□□□□ 0.49
TSKU-204ENST00000533752 COLQQ9Y215 455 aaPredicted RBP18.11■□□□□ 0.49
TSKU-204ENST00000533752 STK36Q9NRP7 1315 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 KIAA0355O15063 1070 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 MAFGO15525 162 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 HOXD8P13378 290 aaPredicted RBP18.1■□□□□ 0.49
TSKU-204ENST00000533752 SREBF1P36956 1147 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 FAAP100Q0VG06 881 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 SCRN1Q12765 414 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 METTL7BQ6UX53 244 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 KATNAL1Q9BW62 490 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 TRIOBPQ9H2D6 2365 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
TSKU-204ENST00000533752 NOP56O00567 594 aaKnown RBP18.09■□□□□ 0.49
TSKU-204ENST00000533752 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 PSMC6P62333 389 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 PTPN11Q06124 597 aaPredicted RBP18.09■□□□□ 0.49
TSKU-204ENST00000533752 MTMR1Q13613 665 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 ZFP91Q96JP5 570 aaPredicted RBP18.09■□□□□ 0.49
TSKU-204ENST00000533752 VPS54Q9P1Q0 977 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 TBX21Q9UL17 535 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 UBIAD1Q9Y5Z9 338 aa18.09■□□□□ 0.49
TSKU-204ENST00000533752 GRIN2DO15399 1336 aa18.08■□□□□ 0.49
TSKU-204ENST00000533752 PPFIA3O75145 1194 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 RAG1P15918 1043 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 XBP1P17861 261 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 ITGB5P18084 799 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.48
TSKU-204ENST00000533752 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.48
TSKU-204ENST00000533752 SP2Q02086 613 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 SEMA3FQ13275 785 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 GALNT17Q6IS24 598 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 IL27Q8NEV9 243 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 GTF3C6Q969F1 213 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 JADE2Q9NQC1 790 aa18.08■□□□□ 0.48
TSKU-204ENST00000533752 LTBP2Q14767 1821 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 RANBP2P49792 3224 aaKnown RBP18.07■□□□□ 0.48
TSKU-204ENST00000533752 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 F2P00734 622 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 CD4P01730 458 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 SUPT20HL2P0C7V6 817 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 NLRP5P59047 1200 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 ARHGAP4P98171 946 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 NBPF20Q3BBV1 942 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 HSDL1Q3SXM5 330 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 CEP55Q53EZ4 464 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 FAM47CQ5HY64 1035 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 HABP4Q5JVS0 413 aaKnown RBP18.07■□□□□ 0.48
TSKU-204ENST00000533752 JAKMIP3Q5VZ66 844 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 SH3RF1Q7Z6J0 888 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 WASF1Q92558 559 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
TSKU-204ENST00000533752 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 MXRA8Q9BRK3 442 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 UBE2OQ9C0C9 1292 aaKnown RBP18.07■□□□□ 0.48
TSKU-204ENST00000533752 TMEM260Q9NX78 707 aa18.07■□□□□ 0.48
TSKU-204ENST00000533752 ZNF76P36508 570 aa18.06■□□□□ 0.48
TSKU-204ENST00000533752 ME3Q16798 604 aa18.06■□□□□ 0.48
TSKU-204ENST00000533752 CYFIP1Q7L576 1253 aa18.06■□□□□ 0.48
TSKU-204ENST00000533752 NIPA1Q7RTP0 329 aa18.06■□□□□ 0.48
TSKU-204ENST00000533752 SESTD1Q86VW0 696 aa18.06■□□□□ 0.48
TSKU-204ENST00000533752 B4GALT4O60513 344 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 TIMP1P01033 207 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 CYP3A4P08684 503 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 ZNF286BP0CG31 522 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 KCNA2P16389 499 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 SETQ01105 290 aaPredicted RBP18.05■□□□□ 0.48
TSKU-204ENST00000533752 DAGLBQ8NCG7 672 aa18.05■□□□□ 0.48
TSKU-204ENST00000533752 BADQ92934 168 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms