RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PSMD14O00487 310 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 MED24O75448 989 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 NDUFB10O96000 172 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 KRT83P78385 493 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 MAN2A1Q16706 1144 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 TMEM179Q6ZVK1 233 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 PNKPQ96T60 521 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 MYO6Q9UM54 1294 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
CACNA1E-208ENST00000533229 EIF3CLB5ME19 914 aaKnown RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ABCB5Q2M3G0 1257 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 USH1GQ495M9 461 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 EIF3CQ99613 913 aaKnown RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ARHGAP20Q9P2F6 1191 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 PLAGL2Q9UPG8 496 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 CYLC1P35663 651 aaPredicted RBP17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ARHGAP4P98171 946 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 CDK17Q00537 523 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 ETNPPLQ8TBG4 499 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 C7orf43Q8WVR3 580 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
CACNA1E-208ENST00000533229 OPLAHO14841 1288 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 GH2P01242 217 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 CYP11B2P19099 503 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 HNRNPH3P31942 346 aaKnown RBP17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 TERF2Q15554 542 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 WHAMMP3Q1A5X7 153 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 PRR16Q569H4 304 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 ARSHQ5FYA8 562 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 TRAPPC11Q7Z392 1133 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 KIAA1328Q86T90 577 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 NOA1Q8NC60 698 aaKnown RBP17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 LENG9Q96B70 501 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 ARFGAP3Q9NP61 516 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 MYH4Q9Y623 1939 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 ABCB11O95342 1321 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
CACNA1E-208ENST00000533229 POTEFA5A3E0 1075 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 YDJCA8MPS7 323 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 FAM86B1E9PN63 330 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 SRGAP2O75044 1071 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 FAM86B2P0C5J1 330 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 POTEIP0CG38 1075 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 PSMC6P62333 389 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 KCNMA1Q12791 1236 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 POTEGQ6S5H5 508 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 MSANTD4Q8NCY6 345 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 GMCL1Q96IK5 515 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 NAP1L4Q99733 375 aaKnown RBP17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 FUT8Q9BYC5 575 aa17.02■□□□□ 0.31
CACNA1E-208ENST00000533229 MYH7BA7E2Y1 1941 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 KRT86O43790 486 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 FGFR1OPO95684 399 aaKnown RBP17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 RHOXF2BP0C7M4 288 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 AP3B2Q13367 1082 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 NELFCDQ8IXH7 590 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 CCDC42Q96M95 316 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 RHOXF2Q9BQY4 288 aa17.01■□□□□ 0.31
CACNA1E-208ENST00000533229 CTAGE15A4D2H0 777 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 LRRC53A6NM62 1247 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 TRAF5O00463 557 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 ATP8B1O43520 1251 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 CTAGE8P0CG41 777 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 SLC12A3P55017 1021 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
CACNA1E-208ENST00000533229 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 FOXR2Q6PJQ5 311 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 CTAGE6Q86UF2 777 aa17■□□□□ 0.31
CACNA1E-208ENST00000533229 FBXO11Q86XK2 927 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms