RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ADD1P35611 737 aaKnown RBP34.81■■■■□ 3.16
SSSCA1-207ENST00000533115 UBE2SQ16763 222 aa34.81■■■■□ 3.16
SSSCA1-207ENST00000533115 SPATA33Q96N06 139 aa34.81■■■■□ 3.16
SSSCA1-207ENST00000533115 UMODL1Q5DID0 1318 aa34.81■■■■□ 3.16
SSSCA1-207ENST00000533115 LAMA2P24043 3122 aaKnown RBP34.8■■■■□ 3.16
SSSCA1-207ENST00000533115 SORBS3O60504 671 aa34.8■■■■□ 3.16
SSSCA1-207ENST00000533115 CHMP4BP1P59074 171 aa34.8■■■■□ 3.16
SSSCA1-207ENST00000533115 PPP1R18Q6NYC8 613 aa34.8■■■■□ 3.16
SSSCA1-207ENST00000533115 RNPC3Q96LT9 517 aaKnown RBP34.8■■■■□ 3.16
SSSCA1-207ENST00000533115 NID2Q14112 1375 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 SPATA31C2B4DYI2 1134 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 hCG_1984214I3L0E3 225 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 NAPAP54920 295 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 HSDL1Q3SXM5 330 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 RUFY3Q7L099 469 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 ZNF713Q8N859 430 aaPredicted RBP34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 MLXIPQ9HAP2 919 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 ZSWIM6Q9HCJ5 1215 aa34.79■■■■□ 3.16
SSSCA1-207ENST00000533115 FIBPO43427 364 aa34.78■■■■□ 3.16
SSSCA1-207ENST00000533115 CYP2C9P11712 490 aa34.78■■■■□ 3.16
SSSCA1-207ENST00000533115 HOXD8P13378 290 aaPredicted RBP34.78■■■■□ 3.16
SSSCA1-207ENST00000533115 TYW1BQ6NUM6 668 aa34.78■■■■□ 3.16
SSSCA1-207ENST00000533115 C16orf59Q7L2K0 433 aa34.78■■■■□ 3.16
SSSCA1-207ENST00000533115 BUD13Q9BRD0 619 aaKnown RBP eCLIP34.78■■■■□ 3.164e-6■■■■□ 21.2
SSSCA1-207ENST00000533115 SPDYE3A6NKU9 549 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 PPFIA4O75335 1185 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 SEMA3FQ13275 785 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 KATNAL1Q9BW62 490 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 RIC8AQ9NPQ8 531 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 PCDHA6Q9UN73 950 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 PCDHA8Q9Y5H6 950 aa34.77■■■■□ 3.16
SSSCA1-207ENST00000533115 STXBP3O00186 592 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 CCL23P55773 120 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 NEDD9Q14511 834 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 NLRX1Q86UT6 975 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 SESTD1Q86VW0 696 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 TEX2Q8IWB9 1127 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 WNT8AQ9H1J5 351 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 IL23AQ9NPF7 189 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 BARHL2Q9NY43 387 aa34.76■■■■□ 3.16
SSSCA1-207ENST00000533115 F2P00734 622 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 ZNF286BP0CG31 522 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 PSEN2P49810 448 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 TMEM240Q5SV17 173 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 TM6SF1Q9BZW5 370 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 BCAS3Q9H6U6 928 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 CYP46A1Q9Y6A2 500 aa34.75■■■■□ 3.15
SSSCA1-207ENST00000533115 ACRP10323 421 aa34.74■■■■□ 3.15
SSSCA1-207ENST00000533115 EVCP57679 992 aa34.74■■■■□ 3.15
SSSCA1-207ENST00000533115 MFSD10Q14728 455 aa34.74■■■■□ 3.15
SSSCA1-207ENST00000533115 PSRC1Q6PGN9 363 aaPredicted RBP34.74■■■■□ 3.15
SSSCA1-207ENST00000533115 DEFB123Q8N688 67 aa34.74■■■■□ 3.15
SSSCA1-207ENST00000533115 HAS3O00219 553 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 ADCY7P51828 1080 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 PFKFB3Q16875 520 aaPredicted RBP34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 METTL7BQ6UX53 244 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 Q7L0L9 218 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 CYFIP1Q7L576 1253 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 ALG1Q9BT22 464 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 EHMT1Q9H9B1 1298 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 NOD1Q9Y239 953 aa34.73■■■■□ 3.15
SSSCA1-207ENST00000533115 SMCO2A6NFE2 343 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 SMAD3P84022 425 aaKnown RBP34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 PTGISQ16647 500 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 KIAA0753Q2KHM9 967 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 ZNF365Q70YC5 407 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 C7orf31Q8N865 590 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 GPRASP2Q96D09 838 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 SENP7Q9BQF6 1050 aa34.72■■■■□ 3.15
SSSCA1-207ENST00000533115 PDIA3P30101 505 aaKnown RBP34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 TOB2Q14106 344 aaPredicted RBP34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 GDF6Q6KF10 455 aaPredicted RBP34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 SCLYQ96I15 445 aa34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 GLT8D2Q9H1C3 349 aa34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 HDAC6Q9UBN7 1215 aa34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 GTF2IRD1Q9UHL9 959 aa34.71■■■■□ 3.15
SSSCA1-207ENST00000533115 NOP56O00567 594 aaKnown RBP34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 PRPF3O43395 683 aaKnown RBP34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 SCG2P13521 617 aa34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 ITGB5P18084 799 aa34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 FAM109BQ6ICB4 259 aaPredicted RBP34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 CDHR1Q96JP9 859 aa34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 C16orf70Q9BSU1 422 aa34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 UBIAD1Q9Y5Z9 338 aa34.7■■■■□ 3.15
SSSCA1-207ENST00000533115 FOSP01100 380 aaPredicted RBP34.69■■■■□ 3.14
SSSCA1-207ENST00000533115 GIMAP8Q8ND71 665 aaPredicted RBP34.69■■■■□ 3.14
SSSCA1-207ENST00000533115 UPF3BQ9BZI7 483 aaKnown RBP34.69■■■■□ 3.14
SSSCA1-207ENST00000533115 PITPNM1O00562 1244 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 BFSP2Q13515 415 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 NTRK3Q16288 839 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 RASIP1Q5U651 963 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 RPUSD2Q8IZ73 545 aaKnown RBP34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 CTAGE1Q96RT6 745 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 GPR20Q99678 358 aa34.68■■■■□ 3.14
SSSCA1-207ENST00000533115 DOCK5Q9H7D0 1870 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 FGBP02675 491 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 LGALS2P05162 132 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 CCT2P78371 535 aaKnown RBP34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 PKN1Q16512 942 aa34.67■■■■□ 3.14
SSSCA1-207ENST00000533115 RETREG2Q8NC44 543 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms