RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 CERKQ8TCT0 537 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 MTMR8Q96EF0 704 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 TUBB2BQ9BVA1 445 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 DBNDD1Q9H9R9 158 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 LTBP4Q8N2S1 1624 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 PNMA6FA0A0J9YX94 578 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 RGL2O15211 777 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 SYF2O95926 243 aaKnown RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 NAP1L1P55209 391 aaKnown RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 CACNA2D4Q7Z3S7 1137 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 PURBQ96QR8 312 aaKnown RBP16.51■□□□□ 0.23
SSH3-210ENST00000532881 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
SSH3-210ENST00000532881 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 ESYT2A0FGR8 921 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 ANKRD65E5RJM6 399 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 TLR2O60603 784 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 TOM1O60784 492 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 CAPN2P17655 700 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 CASP5P51878 434 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 GUF1Q8N442 669 aaKnown RBP16.5■□□□□ 0.23
SSH3-210ENST00000532881 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 MYH7BA7E2Y1 1941 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 PPEF1O14829 653 aaPredicted RBP16.5■□□□□ 0.23
SSH3-210ENST00000532881 USH1GQ495M9 461 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 KIAA0825Q8IV33 1275 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
SSH3-210ENST00000532881 BBOX1O75936 387 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 NOL4O94818 638 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 MAGEA1P43355 309 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
SSH3-210ENST00000532881 POLR2FP61218 127 aaKnown RBP16.49■□□□□ 0.23
SSH3-210ENST00000532881 EHHADHQ08426 723 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 TMEM119Q4V9L6 283 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 MYOCDQ8IZQ8 938 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 PACSIN1Q9BY11 444 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 GOLPH3Q9H4A6 298 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 RABEP2Q9H5N1 569 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 STK17AQ9UEE5 414 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 SNX12Q9UMY4 172 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 PVALEFA0A1B0GWK0 134 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
SSH3-210ENST00000532881 MED24O75448 989 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 ACTN1P12814 892 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 GGCXP38435 758 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
SSH3-210ENST00000532881 HGSNATQ68CP4 663 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 CUL5Q93034 780 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 HPCAL4Q9UM19 191 aa16.49■□□□□ 0.23
SSH3-210ENST00000532881 A0A1W2PQJ5 194 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 ZSCAN5CA6NGD5 496 aaPredicted RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 DDTLA6NHG4 134 aaPredicted RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 ZBTB5O15062 677 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 RNF40O75150 1001 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 GDF11O95390 407 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 PPARDQ03181 441 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 FAM26FQ5R3K3 315 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 APOBEC3HQ6NTF7 200 aaKnown RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 LSM14BQ9BX40 385 aaKnown RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 ZC3H12CQ9C0D7 883 aaKnown RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 CALCOCO1Q9P1Z2 691 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 TRIM37O94972 964 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 FTCDO95954 541 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 PDIA5Q14554 519 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 TXLNBQ8N3L3 684 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 EXOC4Q96A65 974 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 OSBPL9Q96SU4 736 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
SSH3-210ENST00000532881 ZC3H4Q9UPT8 1303 aaKnown RBP16.48■□□□□ 0.23
SSH3-210ENST00000532881 EIF3JO75822 258 aaKnown RBP16.47■□□□□ 0.23
SSH3-210ENST00000532881 PLA2G4BP0C869 781 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms