RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 KLRF2D3W0D1 207 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 GLI1P08151 1106 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 RASA1P20936 1047 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 CLEC4GQ6UXB4 293 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 DYMQ7RTS9 669 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
NXF1-213ENST00000532297 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
NXF1-213ENST00000532297 ZSCAN5CA6NGD5 496 aaPredicted RBP16.41■□□□□ 0.22
NXF1-213ENST00000532297 FAM107AO95990 144 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 CCDC155Q8N6L0 562 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 MS4A14Q96JA4 679 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 SPATA31A5Q5VU36 1347 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 SPATA31A7Q8IWB4 1347 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 CDK17Q00537 523 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 GUCY2DQ02846 1103 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■□□□ 11.4
NXF1-213ENST00000532297 ATP6V1G3Q96LB4 118 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 CCDC114Q96M63 670 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 PIGSQ96S52 555 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 PPANQ9NQ55 473 aaKnown RBP16.41■□□□□ 0.22
NXF1-213ENST00000532297 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
NXF1-213ENST00000532297 HEXIM1O94992 359 aaKnown RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 TXKP42681 527 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 GLE1Q53GS7 698 aaKnown RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 MAST2Q6P0Q8 1798 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 C2CD5Q86YS7 1000 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 PIK3R5Q8WYR1 880 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 SRCAPQ6ZRS2 3230 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 HPDP32754 393 aaPredicted RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 KIF11P52732 1056 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 PPARDQ03181 441 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 PAK2Q13177 524 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 CCDC121Q6ZUS5 278 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 KIAA0895Q8NCT3 520 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
NXF1-213ENST00000532297 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 ARHGAP20Q9P2F6 1191 aa16.4■□□□□ 0.22
NXF1-213ENST00000532297 POTEMA6NI47 508 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
NXF1-213ENST00000532297 LRRC41Q15345 812 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 WLSQ5T9L3 541 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 COA7Q96BR5 231 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 MMTAG2Q9BU76 263 aaKnown RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 GDF3Q9NR23 364 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 CDK5RAP2Q96SN8 1893 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 KCNB1Q14721 858 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 SNCBQ16143 134 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 MAATS1Q7Z4T9 603 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 CYFIP2Q96F07 1278 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
NXF1-213ENST00000532297 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
NXF1-213ENST00000532297 GOLGA6L7A0A1B0GV03 622 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 USP17L5A8MUK1 530 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 AKR1B10O60218 316 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 ZPR1O75312 459 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 PDHBP11177 359 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 BTDP43251 543 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 DRP2Q13474 957 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 CFAP221Q4G0U5 840 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 C6orf89Q6UWU4 347 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 CD302Q8IX05 232 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 TLR10Q9BXR5 811 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 A0A1W2PQJ5 194 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 HMGB1P1B2RPK0 211 aaPredicted RBP16.38■□□□□ 0.21
NXF1-213ENST00000532297 SLC37A4O43826 429 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 TDP2O95551 362 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 DGKHQ86XP1 1220 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 PARP9Q8IXQ6 854 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 EYA3Q99504 573 aa16.38■□□□□ 0.21
NXF1-213ENST00000532297 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms