RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FRMPD2Q68DX3 1309 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 ERICH2A1L162 156 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SOWAHBA6NEL2 793 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 IFIT3O14879 490 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC27A2O14975 620 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 ATP2A1O14983 1001 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 STRNO43815 780 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 PLA2G6O60733 806 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 INHAP05111 366 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 PDHBP11177 359 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 FCER1AP12319 257 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 COPB2P35606 906 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 OAZ1P54368 228 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 EMP3P54852 163 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 GRB14Q14449 540 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 KCTD2Q14681 263 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SART3Q15020 963 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 ENOX2Q16206 610 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 CREB3L3Q68CJ9 461 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SNRNP48Q6IEG0 339 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 STOX1Q6ZVD7 989 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 CYB5R4Q7L1T6 521 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 RASGRP2Q7LDG7 609 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 DPP9Q86TI2 863 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 RIOX2Q8IUF8 465 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 TRMT44Q8IYL2 757 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 REPS2Q8NFH8 660 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 USP6NLQ92738 828 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SPSB2Q99619 263 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 APBA2Q99767 749 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC38A10Q9HBR0 1119 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 RAVER2Q9HCJ3 691 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 GEMIN8Q9NWZ8 242 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 TSR3Q9UJK0 312 aaKnown RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZNF214Q9UL59 606 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 PRR12Q9ULL5 1215 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 PCDHGA11Q9Y5H2 935 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 TAF6LQ9Y6J9 622 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 MYH8P13535 1937 aa6.73□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZSWIM8A7E2V4 1837 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 REC8O95072 547 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 HMGCRP04035 888 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 GOLGA8HP0CJ92 632 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 SNHG28P0DPA3 235 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 CCL5P13501 91 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 ADORA2AP29274 412 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 MCM5P33992 734 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC16A2P36021 539 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 GJA8P48165 433 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 MMP16P51512 607 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 SNAP25P60880 206 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZNF543Q08ER8 600 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 WTAPQ15007 396 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 SEC23AQ15436 765 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZNF394Q53GI3 561 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 TMEM67Q5HYA8 995 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 GPATCH4Q5T3I0 446 aaKnown RBP6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 CCDC174Q6PII3 467 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 CHST3Q7LGC8 479 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 ABRAQ8N0Z2 381 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 FAM160A2Q8N612 972 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 TRIB2Q92519 343 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 MMP19Q99542 508 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 RNF208Q9H0X6 261 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 DDX56Q9NY93 547 aaKnown RBP6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 FBXO40Q9UH90 709 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 RIPK3Q9Y572 518 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 AK5Q9Y6K8 562 aa6.72□□□□□ -1.33
HMGB1P42-201ENST00000532126 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZBTB24O43167 697 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 PRC1O43663 620 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ICAM1P05362 532 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 PGK2P07205 417 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 HOXC6P09630 235 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 PARP1P09874 1014 aaKnown RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ANTXR2P58335 489 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 KRT32Q14532 448 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 MTFR1Q15390 333 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 CCL14Q16627 93 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ASPRV1Q53RT3 343 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 PLEKHG4Q58EX7 1191 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 SYDE2Q5VT97 1194 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 MFSD14CQ5VZR4 134 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 C16orf46Q6P387 395 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 ADGRD1Q6QNK2 874 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 BTNL9Q6UXG8 535 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 CATIPQ7Z7H3 387 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 MB21D2Q8IYB1 491 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 TSEN2Q8NCE0 465 aaKnown RBP6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 CHST13Q8NET6 341 aa6.71□□□□□ -1.34
HMGB1P42-201ENST00000532126 DDX11Q96FC9 970 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms