RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 MMS19Q96T76 1030 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 IFIH1Q9BYX4 1025 aaKnown RBP18.68■□□□□ 0.58
VPS26B-206ENST00000531741 NUCKS1Q9H1E3 243 aaKnown RBP18.68■□□□□ 0.58
VPS26B-206ENST00000531741 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 PANK4Q9NVE7 773 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 PSD3Q9NYI0 1048 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 PCDHA13Q9Y5I0 950 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 COL4A3BPQ9Y5P4 624 aa18.68■□□□□ 0.58
VPS26B-206ENST00000531741 SSU72P8A0A1W2PR75 194 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 H3BQF6 201 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 SLC16A2P36021 539 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 KIF11P52732 1056 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 ITIH3Q06033 890 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 IQCEQ6IPM2 695 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 ZNF572Q7Z3I7 529 aaPredicted RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 TXLNBQ8N3L3 684 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 SYN2Q92777 582 aaPredicted RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 MMRN2Q9H8L6 949 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 FAM207AQ9NSI2 230 aaPredicted RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 PCDHA2Q9Y5H9 948 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 MPHOSPH10O00566 681 aaKnown RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 PJA2O43164 708 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 MARCH6O60337 910 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 TACC1O75410 805 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 SCNN1DP51172 638 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 FKBP1AP62942 108 aaKnown RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 AP3B2Q13367 1082 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 CASP8Q14790 479 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 CCDC65Q8IXS2 484 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 ZC3H3Q8IXZ2 948 aaKnown RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 EXOC4Q96A65 974 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 VIPAS39Q9H9C1 493 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
VPS26B-206ENST00000531741 DUSP10Q9Y6W6 482 aa18.67■□□□□ 0.58
VPS26B-206ENST00000531741 PLEKP08567 350 aaPredicted RBP18.66■□□□□ 0.58
VPS26B-206ENST00000531741 NFIAQ12857 509 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 ASTE1Q2TB18 679 aaPredicted RBP18.66■□□□□ 0.58
VPS26B-206ENST00000531741 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 PDXDC1Q6P996 788 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 DNAJC18Q9H819 358 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 KANSL2Q9H9L4 492 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 ATAD5Q96QE3 1844 aa18.66■□□□□ 0.58
VPS26B-206ENST00000531741 FRMD3A2A2Y4 597 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 LRRC53A6NM62 1247 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
VPS26B-206ENST00000531741 CRKP46108 304 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 HDLBPQ00341 1268 aaKnown RBP18.65■□□□□ 0.58
VPS26B-206ENST00000531741 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 CRYGNQ8WXF5 182 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 MXD3Q9BW11 206 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 ACBD3Q9H3P7 528 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 SNX12Q9UMY4 172 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 MACROD2A1Z1Q3 448 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 RBAK-RBAKDNI3L0D1 243 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 SRGAP2O75044 1071 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 PLA2G4BP0C869 781 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 LRRC41Q15345 812 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 DOK7Q18PE1 504 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 RRAGAQ7L523 313 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 RUBCNQ92622 972 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 IDI2Q9BXS1 227 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 ANO3Q9BYT9 981 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 CEP72Q9P209 647 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
VPS26B-206ENST00000531741 TBX3O15119 743 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 AKR1B10O60218 316 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 SLC1A4P43007 532 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 KCNMA1Q12791 1236 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 DEF6Q9H4E7 631 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 TRAF5O00463 557 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 EEF2P13639 858 aaKnown RBP18.64■□□□□ 0.57
VPS26B-206ENST00000531741 PDE6BP35913 854 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 SLFN13Q68D06 897 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 SUGCTQ9HAC7 445 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 MED4Q9NPJ6 270 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 KIAA1024Q9UPX6 916 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 STK24Q9Y6E0 443 aa18.64■□□□□ 0.57
VPS26B-206ENST00000531741 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
VPS26B-206ENST00000531741 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms