RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 PDLIM7Q9NR12 457 aa16.58■□□□□ 0.24
FOXR1-202ENST00000531539 GRIN2DO15399 1336 aa16.58■□□□□ 0.24
FOXR1-202ENST00000531539 FRMPD4Q14CM0 1322 aa16.58■□□□□ 0.24
FOXR1-202ENST00000531539 LRRC37A2A6NM11 1700 aa16.57■□□□□ 0.24
FOXR1-202ENST00000531539 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
FOXR1-202ENST00000531539 HABP4Q5JVS0 413 aaKnown RBP16.57■□□□□ 0.24
FOXR1-202ENST00000531539 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
FOXR1-202ENST00000531539 CCDC12Q8WUD4 166 aaPredicted RBP16.57■□□□□ 0.24
FOXR1-202ENST00000531539 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
FOXR1-202ENST00000531539 SPATA33Q96N06 139 aa16.57■□□□□ 0.24
FOXR1-202ENST00000531539 INPP4AQ96PE3 977 aaPredicted RBP16.57■□□□□ 0.24
FOXR1-202ENST00000531539 GDF15Q99988 308 aa16.57■□□□□ 0.24
FOXR1-202ENST00000531539 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 PFKFB2O60825 505 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 DTNBO60941 627 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 MMP3P08254 477 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 UBA1P22314 1058 aaKnown RBP16.56■□□□□ 0.24
FOXR1-202ENST00000531539 ICAM3P32942 547 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 SCRN1Q12765 414 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 DGKDQ16760 1214 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 BADQ92934 168 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 C22orf23Q9BZE7 217 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 UBE2OQ9C0C9 1292 aaKnown RBP16.56■□□□□ 0.24
FOXR1-202ENST00000531539 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
FOXR1-202ENST00000531539 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 FIBPO43427 364 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 RAG1P15918 1043 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 GNA11P29992 359 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 NLRP5P59047 1200 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 NEDD9Q14511 834 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 FAM47CQ5HY64 1035 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
FOXR1-202ENST00000531539 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 TRPV6Q9H1D0 765 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
FOXR1-202ENST00000531539 ESYT2A0FGR8 921 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 KIAA0355O15063 1070 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 CDKL5O76039 1030 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 DEXIO95424 95 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 ITGB5P18084 799 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 ITGB8P26012 769 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 BMP8BP34820 402 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 ZNF76P36508 570 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 CLK2P49760 499 aaKnown RBP16.54■□□□□ 0.24
FOXR1-202ENST00000531539 ME3Q16798 604 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 HSDL1Q3SXM5 330 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 GPRASP2Q96D09 838 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 MXRA8Q9BRK3 442 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 ALG1Q9BT22 464 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 SH3GLB2Q9NR46 395 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
FOXR1-202ENST00000531539 KIAA1217Q5T5P2 1943 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 ATP9AO75110 1047 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 CD4P01730 458 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 SP4Q02446 784 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 KAT2BQ92831 832 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 DNAH12Q6ZR08 3092 aa16.53■□□□□ 0.24
FOXR1-202ENST00000531539 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
FOXR1-202ENST00000531539 MAFGO15525 162 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 LARGE1O95461 756 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 TIMP1P01033 207 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 PSEN2P49810 448 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 MTMR1Q13613 665 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 MCTP2Q6DN12 878 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 REXO1Q8N1G1 1221 aaKnown RBP16.52■□□□□ 0.24
FOXR1-202ENST00000531539 GIMAP8Q8ND71 665 aaPredicted RBP16.52■□□□□ 0.24
FOXR1-202ENST00000531539 RASGRP4Q8TDF6 673 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
FOXR1-202ENST00000531539 TRMT13Q9NUP7 481 aaKnown RBP16.52■□□□□ 0.24
FOXR1-202ENST00000531539 MYH7BA7E2Y1 1941 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 B4GALT4O60513 344 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 SUPT20HL2P0C7V6 817 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 ZNF286BP0CG31 522 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 ARP10275 920 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 SREBF1P36956 1147 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 ARHGAP4P98171 946 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 CEP55Q53EZ4 464 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
FOXR1-202ENST00000531539 METTL7BQ6UX53 244 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms