RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCDHB15Q9Y5E8 787 aa10.79□□□□□ -0.68
NEDD8-206ENST00000531430 A0A0D9SFI3 127 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 ZNF213O14771 459 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-206ENST00000531430 CLUL1Q15846 466 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 QRICH1Q2TAL8 776 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 TCEAL5Q5H9L2 206 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 ATP6V0A1Q93050 837 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 MRPL38Q96DV4 380 aaKnown RBP10.78□□□□□ -0.68
NEDD8-206ENST00000531430 RNF41Q9H4P4 317 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-206ENST00000531430 IGFLR1Q9H665 355 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 CLDND1Q9NY35 253 aa10.78□□□□□ -0.68
NEDD8-206ENST00000531430 C17orf102A2RUQ5 167 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 DCXO43602 365 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 PPFIA4O75335 1185 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 GGPS1O95749 300 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 CTSHP09668 335 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 PARP1P09874 1014 aaKnown RBP10.77□□□□□ -0.69
NEDD8-206ENST00000531430 MRE11P49959 708 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 MBTPS1Q14703 1052 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
NEDD8-206ENST00000531430 IQCA1Q86XH1 822 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 TMEM192Q8IY95 271 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 SEPT8Q92599 483 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 FAM50BQ9Y247 325 aa10.77□□□□□ -0.69
NEDD8-206ENST00000531430 MYH7BA7E2Y1 1941 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 KDM4AO75164 1064 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 HOXA13P31271 388 aaPredicted RBP10.76□□□□□ -0.69
NEDD8-206ENST00000531430 HIC1Q14526 733 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 TRIM71Q2Q1W2 868 aaKnown RBP10.76□□□□□ -0.69
NEDD8-206ENST00000531430 HSDL1Q3SXM5 330 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 ZNF589Q86UQ0 364 aaPredicted RBP10.76□□□□□ -0.69
NEDD8-206ENST00000531430 FCHSD1Q86WN1 690 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 DGKHQ86XP1 1220 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 TBC1D10CQ8IV04 446 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 PPTC7Q8NI37 304 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 EMSYQ7Z589 1322 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 PTPRSQ13332 1948 aa10.76□□□□□ -0.69
NEDD8-206ENST00000531430 B4E1Z4 1266 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 H3BNC9 293 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 H3BRB1 525 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 HAS3O00219 553 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 NOP56O00567 594 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 TREHO43280 583 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 F2P00734 622 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 PDE1AP54750 535 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 SP2Q02086 613 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 RBL2Q08999 1139 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 PLEKHG4Q58EX7 1191 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 CCDC178Q5BJE1 867 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 CELF3Q5SZQ8 465 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 TRAF7Q6Q0C0 670 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 FIBCD1Q8N539 461 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 FBXL18Q96ME1 805 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 SAMD11Q96NU1 681 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 AMNQ9BXJ7 453 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 IFIH1Q9BYX4 1025 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 UPF3BQ9BZI7 483 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 NSUN3Q9H649 340 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 TUT1Q9H6E5 874 aaKnown RBP10.75□□□□□ -0.69
NEDD8-206ENST00000531430 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
NEDD8-206ENST00000531430 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 TANC1Q9C0D5 1861 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 COL4A4P53420 1690 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 PIEZO1Q92508 2521 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 SMIM10L2AP0DMW4 78 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 SMIM10L2BP0DMW5 78 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 CTNNB1P35222 781 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 HTRA4P83105 476 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 SP4Q02446 784 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 NHLH1Q02575 133 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 ASPRV1Q53RT3 343 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 KCNV1Q6PIU1 500 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 SERINC5Q86VE9 423 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 GPKOWQ92917 476 aaPredicted RBP eCLIP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 TOP1MTQ969P6 601 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-206ENST00000531430 IL17RAQ96F46 866 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 RNPEPQ9H4A4 650 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 BCAS3Q9H6U6 928 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 SETD4Q9NVD3 440 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 RTEL1Q9NZ71 1219 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 ZSWIM5Q9P217 1185 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms