RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GPATCH4Q5T3I0 446 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 ZNF618Q5T7W0 954 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 MFSD6Q6ZSS7 791 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 DGKHQ86XP1 1220 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 NSUN6Q8TEA1 469 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 MFSD14AQ96MC6 490 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 RMDN3Q96TC7 470 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 ALG1Q9BT22 464 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 UBE2ZQ9H832 354 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 JMJD4Q9H9V9 463 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 ABCB11O95342 1321 aa10.76□□□□□ -0.69
CHMP4A-205ENST00000531158 DCXO43602 365 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 KDM4AO75164 1064 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 IL9P15248 144 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 KCNA4P22459 653 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 SP2Q02086 613 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 GHRHRQ02643 423 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 MFSD10Q14728 455 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 KIAA0753Q2KHM9 967 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 HSDL1Q3SXM5 330 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 HFE2Q6ZVN8 426 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 C7orf31Q8N865 590 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 IL31RAQ8NI17 732 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 TGS1Q96RS0 853 aaKnown RBP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 MPHOSPH6Q99547 160 aaKnown RBP10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 BCAS3Q9H6U6 928 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 LMCD1Q9NZU5 365 aa10.75□□□□□ -0.69
CHMP4A-205ENST00000531158 ABHD14A-ACY1A0A1B0GW23 586 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 SORBS3O60504 671 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 NR3C2P08235 984 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 CASTP20810 708 aaKnown RBP10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 HOXC8P31273 242 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 HSD17B4P51659 736 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PTPN5P54829 565 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 HTRA4P83105 476 aaPredicted RBP10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PTK7Q13308 1070 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 STXBP2Q15833 593 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 DGKDQ16760 1214 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 SERINC5Q86VE9 423 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 STAG2Q8N3U4 1231 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PRSS33Q8NF86 280 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PPTC7Q8NI37 304 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 ESR2Q92731 530 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 IWS1Q96ST2 819 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 RAD9AQ99638 391 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 C16orf70Q9BSU1 422 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 ZBED2Q9BTP6 218 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 IL25Q9H293 177 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 TECTAO75443 2155 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 TTC3P53804 2025 aa10.74□□□□□ -0.69
CHMP4A-205ENST00000531158 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 POTEB3A0JP26 581 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 B4E1Z4 1266 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 LGR5O75473 907 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 EIF3JO75822 258 aaKnown RBP10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 SDSP20132 328 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 UBA1P22314 1058 aaKnown RBP10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 KCNA5P22460 613 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 LEXMQ3ZCV2 418 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 ARHGEF16Q5VV41 709 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 POTEBQ6S5H4 581 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 ERMP1Q7Z2K6 904 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 DBF4BQ8NFT6 615 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 PDCD2LQ9BRP1 358 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 MAF1Q9H063 256 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 TELO2Q9Y4R8 837 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 MRVI1Q9Y6F6 885 aa10.73□□□□□ -0.69
CHMP4A-205ENST00000531158 B4DLN1 442 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 KRT37O76014 449 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 PARNO95453 639 aaKnown RBP10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 CFBP00751 764 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 LINC00271P0C7V0 271 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 HOXA13P31271 388 aaPredicted RBP10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 MRPL12P52815 198 aaKnown RBP10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 LAMC2Q13753 1193 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 IKBKEQ14164 716 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 PGM5Q15124 567 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 PLEKHG4Q58EX7 1191 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms