RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GGPS1O95749 300 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 FGBP02675 491 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 ICAM3P32942 547 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 CHMP4BP1P59074 171 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 PCNX4Q63HM2 1172 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 HEATR3Q7Z4Q2 680 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-221ENST00000531068 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-221ENST00000531068 IL31RAQ8NI17 732 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 IL23AQ9NPF7 189 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
CAPN1-221ENST00000531068 RTEL1Q9NZ71 1219 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 FRMPD4Q14CM0 1322 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 SMCHD1A6NHR9 2005 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 DNAH12Q6ZR08 3092 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 PLXNA1Q9UIW2 1896 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 MAFGO15525 162 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 CD2BP2O95400 341 aaKnown RBP12.6□□□□□ -0.39
CAPN1-221ENST00000531068 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 METAP2P50579 478 aaKnown RBP eCLIP12.6□□□□□ -0.393e-8■■■■■ 34.2
CAPN1-221ENST00000531068 CCL23P55773 120 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 MRPS9P82933 396 aaKnown RBP12.6□□□□□ -0.39
CAPN1-221ENST00000531068 BFSP2Q13515 415 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 RABEP1Q15276 862 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 TMEM240Q5SV17 173 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 Q6ZUG5 572 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 C7orf31Q8N865 590 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 BRF1Q92994 677 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 SENP7Q9BQF6 1050 aa12.6□□□□□ -0.39
CAPN1-221ENST00000531068 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAPN1-221ENST00000531068 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 PFKMP08237 780 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 CYP2C9P11712 490 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 UBA1P22314 1058 aaKnown RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 RFC2P35250 354 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 PSEN2P49810 448 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 NAPAP54920 295 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 SP2Q02086 613 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 FUT2Q10981 343 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 PTGISQ16647 500 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 ZNF697Q5TEC3 545 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 KAT2BQ92831 832 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-221ENST00000531068 PCDHA6Q9UN73 950 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 PCDHA8Q9Y5H6 950 aa12.59□□□□□ -0.39
CAPN1-221ENST00000531068 HAS3O00219 553 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 F2P00734 622 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 ACRP10323 421 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 CPA1P15085 419 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 CDC27P30260 824 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
CAPN1-221ENST00000531068 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
CAPN1-221ENST00000531068 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 MFSD10Q14728 455 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 Q7L0L9 218 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
CAPN1-221ENST00000531068 GPRASP2Q96D09 838 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 GTF2IRD1Q9UHL9 959 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 CYP46A1Q9Y6A2 500 aa12.58□□□□□ -0.4
CAPN1-221ENST00000531068 TMEM265A0A087WTH1 108 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 SMCO2A6NFE2 343 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 H3BRB1 525 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 PARNO95453 639 aaKnown RBP12.57□□□□□ -0.4
CAPN1-221ENST00000531068 ADCY7P51828 1080 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 CAGE1Q8TC20 777 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-221ENST00000531068 WNT8AQ9H1J5 351 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 TUT1Q9H6E5 874 aaKnown RBP12.57□□□□□ -0.4
CAPN1-221ENST00000531068 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
CAPN1-221ENST00000531068 ALPK3Q96L96 1907 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms