RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 C22orf46C9J442 243 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 PRODHO43272 600 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 BCL6P41182 706 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 SERINC3Q13530 473 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 RASGRF1Q13972 1273 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 SF3A1Q15459 793 aaKnown RBP10.45□□□□□ -0.74
CSDE1-213ENST00000530784 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
CSDE1-213ENST00000530784 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 SIT1Q9Y3P8 196 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 KCTD3Q9Y597 815 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 IRAK3Q9Y616 596 aa10.45□□□□□ -0.74
CSDE1-213ENST00000530784 PCF11O94913 1555 aaKnown RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 ARHGAP35Q9NRY4 1499 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 PLCH2O75038 1416 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 YEATS2Q9ULM3 1422 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 IRS4O14654 1257 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 FPR2P25090 351 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 YOD1Q5VVQ6 348 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 CEP68Q76N32 757 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 PANK1Q8TE04 598 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 ZNF669Q96BR6 464 aaPredicted RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 SPATA9Q9BWV2 254 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 BCAS3Q9H6U6 928 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 PFDN2Q9UHV9 154 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 PCDHA2Q9Y5H9 948 aa10.44□□□□□ -0.74
CSDE1-213ENST00000530784 RIMS1Q86UR5 1692 aaKnown RBP10.44□□□□□ -0.74
CSDE1-213ENST00000530784 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 NUAK1O60285 661 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 FGFR1P11362 822 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 PI3P19957 117 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 FBLN1P23142 703 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 MTERF2Q49AM1 385 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 CIAPIN1Q6FI81 312 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 NLRP10Q86W26 655 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 ZSCAN18Q8TBC5 510 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-213ENST00000530784 OSBP2Q969R2 916 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 PEX11GQ96HA9 241 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 IRF2BPLQ9H1B7 796 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 NUDT5Q9UKK9 219 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 NPFFR2Q9Y5X5 522 aa10.43□□□□□ -0.74
CSDE1-213ENST00000530784 SCAPERQ9BY12 1400 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 MYO1BO43795 1136 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 BUB1BO60566 1050 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-213ENST00000530784 PABPC1P11940 636 aaKnown RBP10.42□□□□□ -0.74
CSDE1-213ENST00000530784 RBM10P98175 930 aaKnown RBP10.42□□□□□ -0.74
CSDE1-213ENST00000530784 NSMFQ6X4W1 530 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 USP53Q70EK8 1073 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 TMEFF1Q8IYR6 380 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-213ENST00000530784 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-213ENST00000530784 KIF14Q15058 1648 aa10.42□□□□□ -0.74
CSDE1-213ENST00000530784 TRAV20A0A0B4J274 112 aa10.41□□□□□ -0.74
CSDE1-213ENST00000530784 GTF2A2P52657 109 aa10.41□□□□□ -0.74
CSDE1-213ENST00000530784 PMFBP1Q8TBY8 1022 aa10.41□□□□□ -0.74
CSDE1-213ENST00000530784 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
CSDE1-213ENST00000530784 TSPAN17Q96FV3 270 aa10.41□□□□□ -0.74
CSDE1-213ENST00000530784 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
CSDE1-213ENST00000530784 FAM221BA6H8Z2 402 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 DIAPH1O60610 1272 aaKnown RBP10.4□□□□□ -0.74
CSDE1-213ENST00000530784 SSRP1Q08945 709 aaKnown RBP10.4□□□□□ -0.74
CSDE1-213ENST00000530784 RASA3Q14644 834 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 ZNF385BQ569K4 471 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 EFCAB2Q5VUJ9 269 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 Q8N1Y9 231 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 ALG3Q92685 438 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 TMEM169Q96HH4 297 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 CHAMP1Q96JM3 812 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 X6R8D5 127 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 SIGLEC1Q9BZZ2 1709 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
CSDE1-213ENST00000530784 CLIP1P30622 1438 aa10.4□□□□□ -0.75
CSDE1-213ENST00000530784 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.75
CSDE1-213ENST00000530784 ADCY3O60266 1144 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 ASGR2P07307 311 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 PFKLP17858 780 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 IGFBP6P24592 240 aaPredicted RBP10.39□□□□□ -0.75
CSDE1-213ENST00000530784 LSAMPQ13449 338 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 SLC9A5Q14940 896 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 TARBP2Q15633 366 aaKnown RBP10.39□□□□□ -0.75
CSDE1-213ENST00000530784 NTRK3Q16288 839 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 LCNL1Q6ZST4 164 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 DEPDC7Q96QD5 511 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 DNAJC2Q99543 621 aaKnown RBP10.39□□□□□ -0.75
CSDE1-213ENST00000530784 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
CSDE1-213ENST00000530784 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 ZNF518AQ6AHZ1 1483 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 BLACEA4D250 179 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 RFXAPO00287 272 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 MSCO60682 206 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 ZSCAN22P10073 491 aaPredicted RBP10.38□□□□□ -0.75
CSDE1-213ENST00000530784 ATF2P15336 505 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 PMLP29590 882 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 MROH9Q5TGP6 573 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 FAM129CQ86XR2 697 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 DCP2Q8IU60 420 aaKnown RBP10.38□□□□□ -0.75
CSDE1-213ENST00000530784 RIOX2Q8IUF8 465 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 FBXO41Q8TF61 875 aa10.38□□□□□ -0.75
CSDE1-213ENST00000530784 GPR27Q9NS67 375 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms