RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 PPTC7Q8NI37 304 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 SAMD11Q96NU1 681 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 IWS1Q96ST2 819 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 COL4A6Q14031 1691 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 DCHS1Q96JQ0 3298 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 FGAP02671 866 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 AMHP03971 560 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 LAMC2Q13753 1193 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 SMAD2Q15796 467 aaKnown RBP12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 STXBP2Q15833 593 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 USH1GQ495M9 461 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 PRSS33Q8NF86 280 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 TTC14Q96N46 770 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 FSD1Q9BTV5 496 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 CACNA1HO95180 2353 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 EMSYQ7Z589 1322 aa12.52□□□□□ -0.41
TM9SF1-210ENST00000530563 KIAA1217Q5T5P2 1943 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 C16orf70Q9BSU1 422 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 ALG13Q9NP73 1137 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
TM9SF1-210ENST00000530563 ZDBF2Q9HCK1 2354 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 C5orf67F2Z3F1 127 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 OPLAHO14841 1288 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 MBTPS2O43462 519 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 NR3C2P08235 984 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 THPOP40225 353 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 SP2Q02086 613 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 HYAL1Q12794 435 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 IER5LQ5T953 404 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 BMP8AQ7Z5Y6 402 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 RPAINQ86UA6 219 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 MFSD14AQ96MC6 490 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 CLDND1Q9NY35 253 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
TM9SF1-210ENST00000530563 ABCB11O95342 1321 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 GHRHRQ02643 423 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 GPATCH4Q5T3I0 446 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 EDAQ92838 391 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
TM9SF1-210ENST00000530563 FRYLO94915 3013 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 GRM6O15303 877 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 TREHO43280 583 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 NCK2O43639 380 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 UPP2O95045 317 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 HSD17B4P51659 736 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 TCF15Q12870 199 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 CAMK1Q14012 370 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 CLUL1Q15846 466 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 ADGRF4Q8IZF3 695 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 HELLSQ9NRZ9 838 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 TOMM22Q9NS69 142 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
TM9SF1-210ENST00000530563 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 A0A0D9SFI3 127 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 TBX10O75333 385 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 HSPD1P10809 573 aaKnown RBP12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 BMPR1AP36894 532 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 ADAM15Q13444 863 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 ARHGEF16Q5VV41 709 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 EP400NLQ6ZTU2 488 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 STOX1Q6ZVD7 989 aa12.47□□□□□ -0.41
TM9SF1-210ENST00000530563 VSIG10LQ86VR7 867 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms