RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 LRRC14Q15048 493 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 PPM1JQ5JR12 505 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 NXPE4Q6UWF7 544 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 EXOC6Q8TAG9 804 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 FOXQ1Q9C009 403 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 COPRSQ9NQ92 184 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 PRDM5Q9NQX1 630 aaPredicted RBP10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 MINPP1Q9UNW1 487 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 PA2G4Q9UQ80 394 aaKnown RBP10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 CCDC88AQ3V6T2 1871 aa10.84□□□□□ -0.67
CCDC90B-217ENST00000530253 COL4A5P29400 1685 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 IRX6P78412 446 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 GPSM2P81274 684 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 MESP2Q0VG99 397 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 LRRC24Q50LG9 513 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 SPOCD1Q6ZMY3 1216 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 ATG9AQ7Z3C6 839 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 RTFDC1Q9BY42 306 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 PODXL2Q9NZ53 605 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 RIPOR2Q9Y4F9 1068 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 IRS2Q9Y4H2 1338 aa10.83□□□□□ -0.68
CCDC90B-217ENST00000530253 PNMA6FA0A0J9YX94 578 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 SOWAHDA6NJG2 315 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 EYA2O00167 538 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 CIAO1O76071 339 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 CHRNDQ07001 517 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 LDHAL6AQ6ZMR3 332 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 VGLL2Q8N8G2 317 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 PSMD1Q99460 953 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 PRDM7Q9NQW5 492 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 CTNND2Q9UQB3 1225 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 PITPNM2Q9BZ72 1349 aa10.82□□□□□ -0.68
CCDC90B-217ENST00000530253 WTIPA6NIX2 430 aaPredicted RBP10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 C1QTNF8P60827 252 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 PLCB3Q01970 1234 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 ENOX2Q16206 610 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 TAF7LQ5H9L4 462 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 ZBTB37Q5TC79 503 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 LLGL2Q6P1M3 1020 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 C3orf58Q8NDZ4 430 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 TBC1D16Q8TBP0 767 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 FBF1Q8TES7 1133 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 TOX2Q96NM4 488 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 RNF181Q9P0P0 153 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 XDHP47989 1333 aa10.81□□□□□ -0.68
CCDC90B-217ENST00000530253 NTF4P34130 210 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 RING1Q06587 406 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 MLANAQ16655 118 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 NKPD1Q17RQ9 610 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 SIL1Q9H173 461 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 BIN2Q9UBW5 565 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 POLLQ9UGP5 575 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 CSADQ9Y600 493 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
CCDC90B-217ENST00000530253 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ARAP2Q8WZ64 1704 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 SNAP23O00161 211 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 TAF5LO75529 589 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 SASH1O94885 1247 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 LRIG2O94898 1065 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 KLRK1P26718 216 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 IL15P40933 162 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 RAP1GAPP47736 663 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ZNF507Q8TCN5 953 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ELMO3Q96BJ8 720 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 CCDC120Q96HB5 630 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 GPR101Q96P66 508 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ANKRD2Q9GZV1 360 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 NMRK2Q9NPI5 230 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 ZNF277Q9NRM2 450 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 CNNM1Q9NRU3 951 aa10.79□□□□□ -0.68
CCDC90B-217ENST00000530253 MED23Q9ULK4 1368 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 ZNF609O15014 1411 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 UFL1O94874 794 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 PDE8BO95263 885 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 TSPAN15O95858 294 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 FGFR2P21802 821 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 KIAA2012Q0VF49 1180 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 DSC3Q14574 896 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 ARMCX6Q7L4S7 300 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 KRTAP4-9Q9BYQ8 210 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 CYP8B1Q9UNU6 501 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 EXOC6BQ9Y2D4 811 aa10.78□□□□□ -0.68
CCDC90B-217ENST00000530253 ZNF804BA4D1E1 1349 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms