RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 TRIM45Q9H8W5 580 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 DNAJC3Q13217 504 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 PARP9Q8IXQ6 854 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 PPP1R14AQ96A00 147 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 ZFP69BQ9UJL9 534 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 TNNI1P19237 187 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 SYNPO2Q9UMS6 1093 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 NOD1Q9Y239 953 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 TMCC1O94876 653 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 IFRD2Q12894 506 aaPredicted RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 RRM2BQ7LG56 351 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 UBE4BO95155 1302 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 DNAAF3Q8N9W5 541 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
PDE4DIP-227ENST00000529945 GOLGA8JA6NMD2 632 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 GOLGA8TH3BQL2 631 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 KRT16P08779 473 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 PARVAQ9NVD7 372 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 TEX28O15482 410 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 AKR1D1P51857 326 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 M0R3G1 203 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 RFX8Q6ZV50 586 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 NUDCD1Q96RS6 583 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 PRPF18Q99633 342 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 SLCO1A2P46721 670 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 EIF2B2P49770 351 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 BTN3A2P78410 334 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 EFHD2Q96C19 240 aaPredicted RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 PPP1R14BQ96C90 147 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 SMAD5Q99717 465 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 PPARGC1AQ9UBK2 798 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 DDHD2O94830 711 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 YWHABP31946 246 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 YWHAEP62258 255 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 TP53BP2Q13625 1128 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 OLFML1Q6UWY5 402 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 EXT2Q93063 718 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 MLPHQ9BV36 600 aaPredicted RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 EXOC1LA0A1B0GW35 172 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 NR1D1P20393 614 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 ZNF174Q15697 407 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 SYNJ2BP-COX16A0A087WUM0 186 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 LDHCP07864 332 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 SOX6P35712 828 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 STAT1P42224 750 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 THOC5Q13769 683 aaKnown RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 DESI2Q9BSY9 194 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 COX16Q9P0S2 106 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 ZNF212Q9UDV6 495 aa13.63□□□□□ -0.23
PDE4DIP-227ENST00000529945 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 ATP12AP54707 1039 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 SNRKQ9NRH2 765 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 APOBEC2Q9Y235 224 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 C16orf96A6NNT2 1141 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 F6X3S4 739 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 SEC24BO95487 1268 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 S100A6P06703 90 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 SOX5P35711 763 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 EFTUD2Q15029 972 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 NAA35Q5VZE5 725 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 BZW1Q7L1Q6 419 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 VPS37AQ8NEZ2 397 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 FBXO18Q8NFZ0 1043 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 RUBCNLQ9H714 662 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 FAM47EQ6ZV65 393 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 ACAD11Q709F0 780 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 NANOGNBQ7Z5D8 188 aa13.62□□□□□ -0.23
PDE4DIP-227ENST00000529945 BEGAINQ9BUH8 593 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms