RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 GRK4P32298 578 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 NASPP49321 788 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-205ENST00000529714 KRT85P78386 507 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 DNM1Q05193 864 aaKnown RBP15.46■□□□□ 0.07
SMCO4-205ENST00000529714 NBR1Q14596 966 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.07
SMCO4-205ENST00000529714 ZNF174Q15697 407 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 MAP3K21Q5TCX8 1036 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 TAPT1Q6NXT6 567 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 FBXO16Q8IX29 292 aaPredicted RBP15.46■□□□□ 0.07
SMCO4-205ENST00000529714 FAM20AQ96MK3 541 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 SENP7Q9BQF6 1050 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 PTCH2Q9Y6C5 1203 aa15.46■□□□□ 0.07
SMCO4-205ENST00000529714 YEATS4O95619 227 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 ZNF865P0CJ78 1059 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 CYBAP13498 195 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 ELNP15502 786 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 PRPHP41219 470 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 ATP2C1P98194 919 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 PTGDRQ13258 359 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 TTLL4Q14679 1199 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 PTPAQ15257 358 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 CALCRLQ16602 461 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 IQSEC1Q6DN90 963 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 CCDC62Q6P9F0 684 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 FBXO46Q6PJ61 603 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 SEPT14Q6ZU15 432 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 SLFN12Q8IYM2 578 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 ETNPPLQ8TBG4 499 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 TNPO1Q92973 898 aaKnown RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 ZFP91Q96JP5 570 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 MTMR9Q96QG7 549 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 AGO4Q9HCK5 861 aaKnown RBP15.45■□□□□ 0.06
SMCO4-205ENST00000529714 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 MRVI1Q9Y6F6 885 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 HTTP42858 3142 aa15.45■□□□□ 0.06
SMCO4-205ENST00000529714 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 MSH4O15457 936 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 BAG4O95429 457 aaKnown RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 ARP10275 920 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 SLC39A14Q15043 492 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 FOXD4L6Q3SYB3 417 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 ARL6IP4Q66PJ3 421 aaKnown RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 FOXD4L3Q6VB84 417 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 RIT2Q99578 217 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 ZNF577Q9BSK1 485 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 TBC1D22BQ9NU19 505 aa15.44■□□□□ 0.06
SMCO4-205ENST00000529714 DDX41Q9UJV9 622 aaKnown RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 ZHX1Q9UKY1 873 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-205ENST00000529714 NFASCO94856 1347 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 TCHHQ07283 1943 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 NKRFO15226 690 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMCO4-205ENST00000529714 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
SMCO4-205ENST00000529714 KCNA2P16389 499 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 CACNB2Q08289 660 aaPredicted RBP15.43■□□□□ 0.06
SMCO4-205ENST00000529714 NEDD9Q14511 834 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 CCDC144BQ3MJ40 725 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 CLEC17AQ6ZS10 378 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 LINC00301Q8NCQ3 95 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 KCNG4Q8TDN1 519 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 HAS1Q92839 578 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 FTOQ9C0B1 505 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMCO4-205ENST00000529714 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 PDGFCQ9NRA1 345 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 TFIP11Q9UBB9 837 aaKnown RBP15.43■□□□□ 0.06
SMCO4-205ENST00000529714 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
SMCO4-205ENST00000529714 SEPT4O43236 478 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 MARCH6O60337 910 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 PPP6R2O75170 966 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 INHAP05111 366 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 TXNP10599 105 aaKnown RBP15.42■□□□□ 0.06
SMCO4-205ENST00000529714 AKR1A1P14550 325 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
SMCO4-205ENST00000529714 ADCYAP1R1P41586 468 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 STK38Q15208 465 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 PRAMEF19Q5SWL8 479 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 TRPV1Q8NER1 839 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 SDF4Q9BRK5 362 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
SMCO4-205ENST00000529714 SPTLC2O15270 562 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 DHX15O43143 795 aaKnown RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 GAS7O60861 476 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 ATP9AO75110 1047 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 PSMD10O75832 226 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 ARIH2O95376 493 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 SP2Q02086 613 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms