RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 VSIG10LQ86VR7 867 aa18.1■□□□□ 0.49
CTSB-215ENST00000528965 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
CTSB-215ENST00000528965 CTAGE1Q96RT6 745 aa18.1■□□□□ 0.49
CTSB-215ENST00000528965 PIGSQ96S52 555 aa18.1■□□□□ 0.49
CTSB-215ENST00000528965 ZBED2Q9BTP6 218 aa18.1■□□□□ 0.49
CTSB-215ENST00000528965 EMSYQ7Z589 1322 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 PNMA6FA0A0J9YX94 578 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 ABHD14A-ACY1A0A1B0GW23 586 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 HAS3O00219 553 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 STAM2O75886 525 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 CXCL10P02778 98 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 POU3F3P20264 500 aaPredicted RBP18.09■□□□□ 0.49
CTSB-215ENST00000528965 UBA1P22314 1058 aaKnown RBP18.09■□□□□ 0.49
CTSB-215ENST00000528965 CHMLP26374 656 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 PDE4AP27815 886 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 TAP1Q03518 808 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 MYSM1Q5VVJ2 828 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 UHRF1Q96T88 793 aaPredicted RBP18.09■□□□□ 0.49
CTSB-215ENST00000528965 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
CTSB-215ENST00000528965 SPTBN5Q9NRC6 3674 aaKnown RBP18.09■□□□□ 0.49
CTSB-215ENST00000528965 RGS20O76081 388 aa18.08■□□□□ 0.48
CTSB-215ENST00000528965 FCHSD1Q86WN1 690 aa18.08■□□□□ 0.48
CTSB-215ENST00000528965 CERS4Q9HA82 394 aa18.08■□□□□ 0.48
CTSB-215ENST00000528965 E7EWF7 191 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
CTSB-215ENST00000528965 KIF5BP33176 963 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 PTH1RQ03431 593 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 TROAPQ12815 778 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 IKBKEQ14164 716 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 HSDL1Q3SXM5 330 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 IL31RAQ8NI17 732 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 CTCFLQ8NI51 663 aaPredicted RBP18.07■□□□□ 0.48
CTSB-215ENST00000528965 CUL5Q93034 780 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 MTCH2Q9Y6C9 303 aa18.07■□□□□ 0.48
CTSB-215ENST00000528965 CHD7Q9P2D1 2997 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 FRMPD4Q14CM0 1322 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 C17orf102A2RUQ5 167 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 SGSM2O43147 1006 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 NBNO60934 754 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 DDAH1O94760 285 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 NEDD9Q14511 834 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
CTSB-215ENST00000528965 COG5Q9UP83 839 aa18.06■□□□□ 0.48
CTSB-215ENST00000528965 RFXAPO00287 272 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 CYTH3O43739 400 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 SORBS3O60504 671 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 GJB5O95377 273 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 DEFB103AP81534 67 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 SLC35G1Q2M3R5 365 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 TRIM71Q2Q1W2 868 aaKnown RBP18.05■□□□□ 0.48
CTSB-215ENST00000528965 ZNF618Q5T7W0 954 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 SERINC5Q86VE9 423 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 RRP36Q96EU6 259 aaKnown RBP18.05■□□□□ 0.48
CTSB-215ENST00000528965 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 SPZ1Q9BXG8 430 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 ZNF215Q9UL58 517 aaPredicted RBP18.05■□□□□ 0.48
CTSB-215ENST00000528965 TET1Q8NFU7 2136 aa18.05■□□□□ 0.48
CTSB-215ENST00000528965 TRIP12Q14669 1992 aaPredicted RBP18.04■□□□□ 0.48
CTSB-215ENST00000528965 EPOPA6NHQ4 379 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 H3BRB1 525 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 FIBPO43427 364 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 CAND2O75155 1236 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 LGR5O75473 907 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 LGALS2P05162 132 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 GNAT1P11488 350 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 ICAM3P32942 547 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 THPOP40225 353 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 GNAQP50148 359 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 GPNMBQ14956 572 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 XRRA1Q6P2D8 792 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 METTL7BQ6UX53 244 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 INPP4AQ96PE3 977 aaPredicted RBP18.04■□□□□ 0.48
CTSB-215ENST00000528965 RAD9AQ99638 391 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 LZTS2Q9BRK4 669 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 C16orf70Q9BSU1 422 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 MTA3Q9BTC8 594 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 USP26Q9BXU7 913 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 TUT1Q9H6E5 874 aaKnown RBP18.04■□□□□ 0.48
CTSB-215ENST00000528965 SENP2Q9HC62 589 aa18.04■□□□□ 0.48
CTSB-215ENST00000528965 RSPH10B2B2RC85 870 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 ARHGEF15O94989 841 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 AMHP03971 560 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 RSPH10BP0C881 870 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 SP2Q02086 613 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 GRB10Q13322 594 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
CTSB-215ENST00000528965 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 PIBF1Q8WXW3 757 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 ATP6V0A1Q93050 837 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
CTSB-215ENST00000528965 LMCD1Q9NZU5 365 aa18.03■□□□□ 0.48
CTSB-215ENST00000528965 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
CTSB-215ENST00000528965 PRRC2BQ5JSZ5 2229 aaKnown RBP18.03■□□□□ 0.48
CTSB-215ENST00000528965 NCOR1O75376 2440 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 SMIM10L2AP0DMW4 78 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 SMIM10L2BP0DMW5 78 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms