RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 KIF11P52732 1056 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 NFIAQ12857 509 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L6PQ6QN14 398 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 IFIH1Q9BYX4 1025 aaKnown RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 DEF6Q9H4E7 631 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 FOCADQ5VW36 1801 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 UBR3Q6ZT12 1888 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 SPATA31A6Q5VVP1 1343 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 E9PMD0 336 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 LCA5LO95447 670 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 SEPT2Q15019 361 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 HHIPL2Q6UWX4 724 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 CAGE1Q8TC20 777 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 BAP1Q92560 729 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 RPGRIP1Q96KN7 1286 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 TBC1D7Q9P0N9 293 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.55
AP002008.3-201ENST00000528614 LRRIQ3A6PVS8 624 aaPredicted RBP11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 G3V3G9 751 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 TRAF5O00463 557 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 AKR1B10O60218 316 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 HYIQ5T013 277 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 PROM2Q8N271 834 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 TRIM58Q8NG06 486 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 TEKT1Q969V4 418 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 SH2D4AQ9H788 454 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 VPS18Q9P253 973 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 NPHP3-ACAD11A0A0J9YXS1 232 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 TACC1O75410 805 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 MOCS3O95396 460 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 QRICH1Q2TAL8 776 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 ZCWPW2Q504Y3 356 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 FOXR2Q6PJQ5 311 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 EXOC4Q96A65 974 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 FGFBP2Q9BYJ0 223 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 JRKLQ9Y4A0 524 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 COL4A3BPQ9Y5P4 624 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
AP002008.3-201ENST00000528614 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 MAGEA1P43355 309 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CCDC40Q4G0X9 1142 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 NELFCDQ8IXH7 590 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 NAP1L4Q99733 375 aaKnown RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 DNAJC18Q9H819 358 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 PCDHA1Q9Y5I3 950 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 AFF2P51816 1311 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 FAM196BA6NMK8 535 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 POTECB2RU33 542 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 ZMYND10O75800 440 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 MCM3P25205 808 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CRKP46108 304 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CACNB3P54284 484 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 C2orf54Q08AI8 447 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 TCP10Q12799 353 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CCDC102AQ96A19 550 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 CALCOCO1Q9P1Z2 691 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 PCDHA2Q9Y5H9 948 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 PCDHAC2Q9Y5I4 1007 aa11.63□□□□□ -0.55
AP002008.3-201ENST00000528614 STAT3P40763 770 aa11.62□□□□□ -0.55
AP002008.3-201ENST00000528614 USP11P51784 963 aa11.62□□□□□ -0.55
AP002008.3-201ENST00000528614 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
AP002008.3-201ENST00000528614 ASTE1Q2TB18 679 aaPredicted RBP11.62□□□□□ -0.55
AP002008.3-201ENST00000528614 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms