RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 BCAS3Q9H6U6 928 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 PCDH10Q9P2E7 1040 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 CLTBP09497 229 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
HIF3A-211ENST00000528563 MAGEA10P43363 369 aaPredicted RBP19.28■□□□□ 0.68
HIF3A-211ENST00000528563 SCRN1Q12765 414 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
HIF3A-211ENST00000528563 KIF2CQ99661 725 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 SH3GLB2Q9NR46 395 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 TMEM260Q9NX78 707 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 PRKAG2Q9UGJ0 569 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 UBIAD1Q9Y5Z9 338 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 RANBP2P49792 3224 aaKnown RBP19.28■□□□□ 0.68
HIF3A-211ENST00000528563 MROH7Q68CQ1 1323 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 FIBPO43427 364 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 GGPS1O95749 300 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 MMP3P08254 477 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 ITGB5P18084 799 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 BMP8BP34820 402 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 CPLX2Q6PUV4 134 aaKnown RBP19.28■□□□□ 0.68
HIF3A-211ENST00000528563 FAM126BQ8IXS8 530 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 PPTC7Q8NI37 304 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 C6orf50Q9HD87 102 aa19.28■□□□□ 0.68
HIF3A-211ENST00000528563 PPFIA4O75335 1185 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 CD4P01730 458 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.67
HIF3A-211ENST00000528563 AP3B2Q13367 1082 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 DGKDQ16760 1214 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 HSDL1Q3SXM5 330 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 NLRX1Q86UT6 975 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 GPRASP2Q96D09 838 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 SENP7Q9BQF6 1050 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 C22orf23Q9BZE7 217 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 EHMT1Q9H9B1 1298 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 MYH7BA7E2Y1 1941 aa19.27■□□□□ 0.67
HIF3A-211ENST00000528563 DEXIO95424 95 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 ITGB8P26012 769 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 GNA11P29992 359 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 RBM25P49756 843 aaKnown RBP19.26■□□□□ 0.67
HIF3A-211ENST00000528563 NEDD9Q14511 834 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 ME3Q16798 604 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 NBPF20Q3BBV1 942 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 HABP4Q5JVS0 413 aaKnown RBP19.26■□□□□ 0.67
HIF3A-211ENST00000528563 MCTP2Q6DN12 878 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 KAT2BQ92831 832 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 PGBD1Q96JS3 809 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 SPATA33Q96N06 139 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 ANO3Q9BYT9 981 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 PRDM5Q9NQX1 630 aaPredicted RBP19.26■□□□□ 0.67
HIF3A-211ENST00000528563 TMEM39AQ9NV64 488 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 VPS54Q9P1Q0 977 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 TBX21Q9UL17 535 aa19.26■□□□□ 0.67
HIF3A-211ENST00000528563 SCN10AQ9Y5Y9 1956 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 MAFGO15525 162 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 CTDNEP1O95476 244 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 SREBF1P36956 1147 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 MDM2Q00987 491 aaPredicted RBP19.25■□□□□ 0.67
HIF3A-211ENST00000528563 JAKMIP3Q5VZ66 844 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 CRYGNQ8WXF5 182 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 LBHD1Q9BQE6 289 aaPredicted RBP19.25■□□□□ 0.67
HIF3A-211ENST00000528563 MLXIPQ9HAP2 919 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 JADE2Q9NQC1 790 aa19.25■□□□□ 0.67
HIF3A-211ENST00000528563 SORBS3O60504 671 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 ATP9AO75110 1047 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 CDKL5O76039 1030 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 NFRKBQ6P4R8 1299 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 METTL7BQ6UX53 244 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 CYFIP1Q7L576 1253 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 REXO1Q8N1G1 1221 aaKnown RBP19.24■□□□□ 0.67
HIF3A-211ENST00000528563 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 CYP2W1Q8TAV3 490 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 BICD2Q8TD16 824 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 CDHR1Q96JP9 859 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 MXRA8Q9BRK3 442 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 TRPV6Q9H1D0 765 aa19.24■□□□□ 0.67
HIF3A-211ENST00000528563 TLR3O15455 904 aaKnown RBP19.23■□□□□ 0.67
HIF3A-211ENST00000528563 LARGE1O95461 756 aa19.23■□□□□ 0.67
HIF3A-211ENST00000528563 FAM177A1Q8N128 213 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-211ENST00000528563 NECAB1Q8N987 351 aa19.23■□□□□ 0.67
HIF3A-211ENST00000528563 GIMAP8Q8ND71 665 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-211ENST00000528563 BADQ92934 168 aa19.23■□□□□ 0.67
HIF3A-211ENST00000528563 AIFM3Q96NN9 605 aa19.23■□□□□ 0.67
HIF3A-211ENST00000528563 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 MEIS1O00470 390 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 B4GALT4O60513 344 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 TIMP1P01033 207 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 CYP3A4P08684 503 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 KCNA2P16389 499 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 ARHGAP4P98171 946 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 MTMR1Q13613 665 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 CEP55Q53EZ4 464 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 GTF3C6Q969F1 213 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 UBE2OQ9C0C9 1292 aaKnown RBP19.22■□□□□ 0.67
HIF3A-211ENST00000528563 KCNH7Q9NS40 1196 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 HAS3O00219 553 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 DTNBO60941 627 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 RAG1P15918 1043 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms