RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	NOC4L	Q9BVI4	516 aa	Known RBP	11.36	□□□□□ -0.59
PGAP2-231	ENST00000528216	TTYH3	Q9C0H2	523 aa		11.36	□□□□□ -0.59
PGAP2-231	ENST00000528216	GINM1	Q9NU53	330 aa		11.36	□□□□□ -0.59
PGAP2-231	ENST00000528216	RABGAP1	Q9Y3P9	1069 aa		11.36	□□□□□ -0.59
PGAP2-231	ENST00000528216	TTC26	A0AVF1	554 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	CTAGE9	A4FU28	777 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	SPDYE2B	A6NHP3	402 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	MEIS2	O14770	477 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	NDUFA10	O95299	355 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	SPDYE6	P0CI01	402 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	H2AFX	P16104	143 aa	Predicted RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	TRIM21	P19474	475 aa	Known RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	ARHGAP4	P98171	946 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FKBP3	Q00688	224 aa	Known RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	PPP2R3A	Q06190	1150 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	VWA3B	Q502W6	1294 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FAM83A	Q86UY5	434 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FAM160B2	Q86V87	743 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	GPR161	Q8N6U8	529 aa	Known RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	AGBL3	Q8NEM8	1001 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	CHURC1	Q8WUH1	139 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	RABGGTA	Q92696	567 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	CSRNP1	Q96S65	589 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	PNMA2	Q9UL42	364 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	TMX2	Q9Y320	296 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FRMD3	A2A2Y4	597 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	POTEM	A6NI47	508 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	DLGAP5	Q15398	846 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	ELF2	Q15723	593 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	WHAMMP3	Q1A5X7	153 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FAM26F	Q5R3K3	315 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	DNAJC19	Q96DA6	116 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	GML	Q99445	158 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	DESI2	Q9BSY9	194 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	TSGA10	Q9BZW7	698 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	SEMA6B	Q9H3T3	888 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	TDRD3	Q9H7E2	651 aa	Known RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	MRPL44	Q9H9J2	332 aa	Known RBP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	KCNQ5	Q9NR82	932 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	PANK4	Q9NVE7	773 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	CDC23	Q9UJX2	597 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	ZNRF3	Q9ULT6	936 aa		11.35	□□□□□ -0.59
PGAP2-231	ENST00000528216	FER1L6	Q2WGJ9	1857 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216		B4DLN1	442 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	EIF3CL	B5ME19	914 aa	Known RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	PES1	O00541	588 aa	Known RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	GH2	P01242	217 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	PLA2G4B	P0C869	781 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	FCER1A	P12319	257 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	RPA1	P27694	616 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	STAT2	P52630	851 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	MARS	P56192	900 aa	Known RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	ERVK-24	P63145	666 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	COASY	Q13057	564 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	IK	Q13123	557 aa	Predicted RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	PTPN21	Q16825	1174 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	EDRF1	Q3B7T1	1238 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	SPDYE2	Q495Y8	402 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	CREBRF	Q8IUR6	639 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	SAMD3	Q8N6K7	520 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	ETNPPL	Q8TBG4	499 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	GOLGA1	Q92805	767 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	PRMT6	Q96LA8	375 aa	Predicted RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	WDR24	Q96S15	920 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	EIF3C	Q99613	913 aa	Known RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	NAPG	Q99747	312 aa	Predicted RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	NDST4	Q9H3R1	872 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	SLC39A2	Q9NP94	309 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	DDX41	Q9UJV9	622 aa	Known RBP	11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	FAM184B	Q9ULE4	1060 aa		11.34	□□□□□ -0.59
PGAP2-231	ENST00000528216	USP17L15	C9J2P7	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L13	C9JLJ4	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L11	C9JVI0	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L18	D6R9N7	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L22	D6RA61	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L17	D6RBQ6	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L19	D6RCP7	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L20	D6RJB6	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	KRT86	O43790	486 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	RAD17	O75943	681 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	IDE	P14735	1019 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	YY1	P25490	414 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	CACNB3	P54284	484 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	FAM193A	P78312	1265 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L24	Q0WX57	530 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	MTF1	Q14872	753 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZCWPW2	Q504Y3	356 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	MIIP	Q5JXC2	388 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	DPY19L2	Q6NUT2	758 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	USP17L6P	Q6QN14	398 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	ZNF526	Q8TF50	670 aa	Predicted RBP	11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	DEFB129	Q9H1M3	183 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	DNM3	Q9UQ16	869 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	MRPL11	Q9Y3B7	192 aa	Known RBP	11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	GJA3	Q9Y6H8	435 aa		11.33	□□□□□ -0.6
PGAP2-231	ENST00000528216	YDJC	A8MPS7	323 aa		11.32	□□□□□ -0.6
PGAP2-231	ENST00000528216	FZD9	O00144	591 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms