RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RNPC3Q96LT9 517 aaKnown RBP37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 SPATA31C2B4DYI2 1134 aa37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 FIBPO43427 364 aa37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 PPFIA4O75335 1185 aa37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 FAM47CQ5HY64 1035 aa37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 KATNAL1Q9BW62 490 aa37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 V9GY48 417 aaPredicted RBP37.97■■■■□ 3.67
SSSCA1-205ENST00000527920 F2P00734 622 aa37.96■■■■□ 3.67
SSSCA1-205ENST00000527920 FAM109BQ6ICB4 259 aaPredicted RBP37.96■■■■□ 3.67
SSSCA1-205ENST00000527920 SPATA33Q96N06 139 aa37.96■■■■□ 3.67
SSSCA1-205ENST00000527920 EVCP57679 992 aa37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 PSRC1Q6PGN9 363 aaPredicted RBP37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 ZFP91Q96JP5 570 aaPredicted RBP37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 TM6SF1Q9BZW5 370 aa37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 ZSWIM6Q9HCJ5 1215 aa37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 NAP1L2Q9ULW6 460 aaPredicted RBP37.95■■■■□ 3.67
SSSCA1-205ENST00000527920 SPDYE3A6NKU9 549 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 SMAD3P84022 425 aaKnown RBP37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 NEDD9Q14511 834 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 HSDL1Q3SXM5 330 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 C16orf59Q7L2K0 433 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 BUD13Q9BRD0 619 aaKnown RBP eCLIP37.94■■■■□ 3.664e-6■■■■□ 21.2
SSSCA1-205ENST00000527920 IL23AQ9NPF7 189 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 BARHL2Q9NY43 387 aa37.94■■■■□ 3.66
SSSCA1-205ENST00000527920 UMODL1Q5DID0 1318 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 ADD1P35611 737 aaKnown RBP37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 NAPAP54920 295 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 SEMA3FQ13275 785 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 UBE2SQ16763 222 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 TMEM240Q5SV17 173 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 RUFY3Q7L099 469 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 SENP7Q9BQF6 1050 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 GLT8D2Q9H1C3 349 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 MLXIPQ9HAP2 919 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 RIC8AQ9NPQ8 531 aa37.93■■■■□ 3.66
SSSCA1-205ENST00000527920 HAS3O00219 553 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 TYW1BQ6NUM6 668 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 METTL7BQ6UX53 244 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 NLRX1Q86UT6 975 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 GPRASP2Q96D09 838 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 WNT8AQ9H1J5 351 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 EHMT1Q9H9B1 1298 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 RTEL1Q9NZ71 1219 aa37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 LAMA2P24043 3122 aaKnown RBP37.92■■■■□ 3.66
SSSCA1-205ENST00000527920 STXBP3O00186 592 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 PITPNM1O00562 1244 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 CYP2C9P11712 490 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 PSEN2P49810 448 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 DEFB123Q8N688 67 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 CDHR1Q96JP9 859 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 PCDHA6Q9UN73 950 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 PCDHA8Q9Y5H6 950 aa37.91■■■■□ 3.66
SSSCA1-205ENST00000527920 RASIP1Q5U651 963 aa37.9■■■■□ 3.66
SSSCA1-205ENST00000527920 CYP46A1Q9Y6A2 500 aa37.9■■■■□ 3.66
SSSCA1-205ENST00000527920 FOSP01100 380 aaPredicted RBP37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 ZNF286BP0CG31 522 aa37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 MFSD10Q14728 455 aa37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 PFKFB3Q16875 520 aaPredicted RBP37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 GIMAP8Q8ND71 665 aaPredicted RBP37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 GTF2IRD1Q9UHL9 959 aa37.89■■■■□ 3.66
SSSCA1-205ENST00000527920 ADCY7P51828 1080 aa37.88■■■■□ 3.65
SSSCA1-205ENST00000527920 CCL23P55773 120 aa37.88■■■■□ 3.65
SSSCA1-205ENST00000527920 NOD1Q9Y239 953 aa37.88■■■■□ 3.65
SSSCA1-205ENST00000527920 CHMP4BP1P59074 171 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 PTGISQ16647 500 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 KIAA0753Q2KHM9 967 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 ZNF365Q70YC5 407 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 RPUSD2Q8IZ73 545 aaKnown RBP37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 C7orf31Q8N865 590 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 PPP1R13LQ8WUF5 828 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 UBIAD1Q9Y5Z9 338 aa37.87■■■■□ 3.65
SSSCA1-205ENST00000527920 NOP56O00567 594 aaKnown RBP37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 PFKMP08237 780 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 SCG2P13521 617 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 ITGB5P18084 799 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 BFSP2Q13515 415 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 GDF6Q6KF10 455 aaPredicted RBP37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 CTAGE1Q96RT6 745 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 C16orf70Q9BSU1 422 aa37.86■■■■□ 3.65
SSSCA1-205ENST00000527920 MYH7BA7E2Y1 1941 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 ESYT2A0FGR8 921 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 SMCO2A6NFE2 343 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 MAFGO15525 162 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 PRPF3O43395 683 aaKnown RBP37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 SORBS3O60504 671 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 ACRP10323 421 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 PDIA3P30101 505 aaKnown RBP37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 AP3B2Q13367 1082 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 TOB2Q14106 344 aaPredicted RBP37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 CYFIP1Q7L576 1253 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 HERVK_113Q902F9 699 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 MTIF3Q9H2K0 278 aaKnown RBP37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 BCAS3Q9H6U6 928 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 MTMR10Q9NXD2 777 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 HDAC6Q9UBN7 1215 aa37.85■■■■□ 3.65
SSSCA1-205ENST00000527920 RFC2P35250 354 aa37.84■■■■□ 3.65
SSSCA1-205ENST00000527920 NTRK3Q16288 839 aa37.84■■■■□ 3.65
SSSCA1-205ENST00000527920 Q7L0L9 218 aa37.84■■■■□ 3.65
SSSCA1-205ENST00000527920 CCDC155Q8N6L0 562 aa37.84■■■■□ 3.65
SSSCA1-205ENST00000527920 CAGE1Q8TC20 777 aa37.84■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms