RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NFKBIL1Q9UBC1 381 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 NOD1Q9Y239 953 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 DLC1Q96QB1 1528 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 TECPR2O15040 1411 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 NRXN1Q9ULB1 1477 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 GOLGA8IPA6NC78 632 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PDE1BQ01064 536 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 NOGQ13253 232 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 MARCH10Q8NA82 808 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ST13P5Q8NFI4 369 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 RFWD2Q8NHY2 731 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ATP6V1E2Q96A05 226 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 TTC1Q99614 292 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CNOT10Q9H9A5 744 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 IQGAP3Q86VI3 1631 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CFLARO15519 480 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 E2F6O75461 281 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 MSH2P43246 934 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PLCD1P51178 756 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PDZD4Q76G19 769 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PRPF38AQ8NAV1 312 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PHF21AQ96BD5 680 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CCDC51Q96ER9 411 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 LRRC37BQ96QE4 947 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 SLF1Q9BQI6 1058 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CRNKL1Q9BZJ0 848 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 RAB20Q9NX57 234 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 MBD2Q9UBB5 411 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 PRAG1Q86YV5 1406 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 A0A0G2JLW4 131 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CELF2O95319 508 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 GSNP06396 782 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 UQCRFS1P1P0C7P4 283 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 BCRP11274 1271 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ATF2P15336 505 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 TCF3P15923 654 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 SERPINB1P30740 379 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 EPHX2P34913 555 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 KPNA2P52292 529 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 STAT2P52630 851 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 KCNA1Q09470 495 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 BFSP1Q12934 665 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 STX3Q13277 289 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 SLC30A9Q6PML9 568 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ANO5Q75V66 913 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 CSGALNACT2Q8N6G5 542 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 SIKE1Q9BRV8 207 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 IFIH1Q9BYX4 1025 aaKnown RBP7.84□□□□□ -1.15
CTNND1-216ENST00000527467 EXOC7Q9UPT5 735 aa7.84□□□□□ -1.15
CTNND1-216ENST00000527467 ZNF263O14978 683 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 SUPT3HO75486 399 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 MTRF1O75570 445 aaKnown RBP7.84□□□□□ -1.16
CTNND1-216ENST00000527467 TCP1P17987 556 aaKnown RBP7.84□□□□□ -1.16
CTNND1-216ENST00000527467 UBE3AQ05086 875 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 KMT5BQ4FZB7 885 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 SFMBT2Q5VUG0 894 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 PPP4R4Q6NUP7 873 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.16
CTNND1-216ENST00000527467 SPDYE1Q8NFV5 336 aaPredicted RBP7.84□□□□□ -1.16
CTNND1-216ENST00000527467 NKX2-3Q8TAU0 364 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 RAET1EQ8TD07 263 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 RAPGEF5Q92565 580 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 EXOC4Q96A65 974 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 NACA2Q9H009 215 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 INTUQ9ULD6 942 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 CNTNAP4Q9C0A0 1308 aa7.84□□□□□ -1.16
CTNND1-216ENST00000527467 FAM95CA0A1B0GW59 222 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 LZTS3O60299 673 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 TSPY3P0CV98 308 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 TSPY8P0CW00 308 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 S100A5P33763 92 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 LONRF3Q496Y0 759 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 LDHAL6AQ6ZMR3 332 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 SNX21Q969T3 373 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 KIF2CQ99661 725 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 ZNF277Q9NRM2 450 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 A0A1W2PP64 1363 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 CCDC78A2IDD5 438 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 TMEM247A6NEH6 219 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 RASSF9O75901 435 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 PDHA1P08559 390 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 GNA11P29992 359 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 GUCY1A3Q02108 690 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 DHX9Q08211 1270 aaKnown RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 PDE4DQ08499 809 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 SLC39A6Q13433 755 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 CNGA2Q16280 664 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 TRIM71Q2Q1W2 868 aaKnown RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 CAMKK2Q96RR4 588 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 DPH5Q9H2P9 285 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 RGS12O14924 1447 aa7.83□□□□□ -1.16
CTNND1-216ENST00000527467 PPRC1Q5VV67 1664 aaKnown RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 CTNND1O60716 968 aaKnown RBP7.83□□□□□ -1.16
CTNND1-216ENST00000527467 FOSL2P15408 326 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms