RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	DPY19L1	Q2PZI1	675 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	TMED8	Q6PL24	325 aa	Predicted RBP	4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	KIAA0825	Q8IV33	1275 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	FAM126B	Q8IXS8	530 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	ADCY4	Q8NFM4	1077 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	HAUS7	Q99871	368 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	AP5M1	Q9H0R1	490 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	SLC52A1	Q9NWF4	448 aa		4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.66	□□□□□ -1.66
CLNS1A-209	ENST00000527299	VGLL3	A8MV65	326 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CYP1A1	P04798	512 aa	Predicted RBP	4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	APP	P05067	770 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TGFB2	P61812	414 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PURA	Q00577	322 aa	Known RBP	4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	RALBP1	Q15311	655 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CR1L	Q2VPA4	569 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PRAMEF18	Q5VWM3	479 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	SLFN13	Q68D06	897 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MBLAC2	Q68D91	279 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	RUFY4	Q6ZNE9	571 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ARHGEF18	Q6ZSZ5	1173 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	SEC14L1	Q92503	715 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	DPF3	Q92784	378 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	FERD3L	Q96RJ6	166 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	DNAJC2	Q99543	621 aa	Known RBP	4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	SPON2	Q9BUD6	331 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TRAIP	Q9BWF2	469 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	KLHL25	Q9H0H3	589 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TMEM168	Q9H0V1	697 aa		4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	NGRN	Q9NPE2	291 aa	Known RBP	4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.65	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZNF623	O75123	536 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TGM1	P22735	817 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	IL13	P35225	146 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	SLC6A11	P48066	632 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	AMPD2	Q01433	879 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	GRB10	Q13322	594 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	FHL2	Q14192	279 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ARHGEF39	Q8N4T4	335 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299		Q8TCH9	128 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PTPN18	Q99952	460 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	L2HGDH	Q9H9P8	463 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MARCH2	Q9P0N8	246 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	C11orf21	Q9P2W6	132 aa		4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CFAP65	Q6ZU64	1925 aa	Known RBP	4.64	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MAFG	O15525	162 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZSCAN20	P17040	1043 aa	Predicted RBP	4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	STAT5A	P42229	794 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MLLT6	P55198	1093 aa	Predicted RBP	4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	SMN1	Q16637	294 aa	Known RBP	4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CC2D1B	Q5T0F9	858 aa	Known RBP	4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MILR1	Q7Z6M3	343 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	KBTBD2	Q8IY47	623 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	RCC1L	Q96I51	464 aa	Known RBP	4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MMP19	Q99542	508 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	GBP3	Q9H0R5	595 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MEGF9	Q9H1U4	602 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	JADE2	Q9NQC1	790 aa		4.63	□□□□□ -1.67
CLNS1A-209	ENST00000527299	NACAD	O15069	1562 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	NPIPB8	E9PQR5	432 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TCERG1	O14776	1098 aa	Known RBP	4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PPM1B	O75688	479 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	THBD	P07204	575 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	NKX3-2	P78367	333 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	HEATR6	Q6AI08	1181 aa	Known RBP	4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ADAT2	Q7Z6V5	191 aa	Known RBP	4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZNF575	Q86XF7	245 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	EGFL6	Q8IUX8	553 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	KLHL36	Q8N4N3	616 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZNF341	Q9BYN7	854 aa		4.62	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TTC36	A6NLP5	189 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	C22orf46	C9J442	243 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	B4GALT4	O60513	344 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	EPHX1	P07099	455 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ANAPC15	P60006	121 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	FOXE3	Q13461	319 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MIIP	Q5JXC2	388 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	RIOX2	Q8IUF8	465 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	GPATCH11	Q8N954	259 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	COPS5	Q92905	334 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	FGD4	Q96M96	766 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	TSPYL1	Q9H0U9	437 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PRDM16	Q9HAZ2	1276 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CLEC1B	Q9P126	229 aa		4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.61	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CYP7B1	O75881	506 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	PLS3	P13797	630 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	RIPK4	P57078	832 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	INHBE	P58166	350 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	NFATC3	Q12968	1075 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MRPL58	Q14197	206 aa	Known RBP	4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	GNPTAB	Q3T906	1256 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	HSP90AB3P	Q58FF7	597 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	MROH9	Q5TGP6	573 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CERS3	Q8IU89	383 aa		4.6	□□□□□ -1.67
CLNS1A-209	ENST00000527299	CHFR	Q96EP1	664 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms