RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
CTSB-214ENST00000527243 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
CTSB-214ENST00000527243 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
CTSB-214ENST00000527243 ATP11BQ9Y2G3 1177 aa12.85□□□□□ -0.35
CTSB-214ENST00000527243 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
CTSB-214ENST00000527243 SCN10AQ9Y5Y9 1956 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 CPLX1O14810 134 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 FIBPO43427 364 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 KPNA6O60684 536 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 DEXIO95424 95 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 GGPS1O95749 300 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 CD4P01730 458 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 MMP3P08254 477 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SYN1P17600 705 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 FAM177A1Q8N128 213 aaPredicted RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 KAT2BQ92831 832 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 GPRASP2Q96D09 838 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SENP7Q9BQF6 1050 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
CTSB-214ENST00000527243 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 STK36Q9NRP7 1315 aa12.84□□□□□ -0.35
CTSB-214ENST00000527243 KIAA0355O15063 1070 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 EDIL3O43854 480 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 PSMC6P62333 389 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 ITGA7Q13683 1181 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
CTSB-214ENST00000527243 CPLX2Q6PUV4 134 aaKnown RBP12.83□□□□□ -0.36
CTSB-214ENST00000527243 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 MTG1Q9BT17 334 aaPredicted RBP12.83□□□□□ -0.36
CTSB-214ENST00000527243 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 TBX21Q9UL17 535 aa12.83□□□□□ -0.36
CTSB-214ENST00000527243 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
CTSB-214ENST00000527243 M0R2N6 131 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 HAS3O00219 553 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 ATP9AO75110 1047 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 CDKL5O76039 1030 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 MYL3P08590 195 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 CYP3A4P08684 503 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 CLTBP09497 229 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 KCNA2P16389 499 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 ITGB8P26012 769 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 GNA11P29992 359 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 BMP8BP34820 402 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 MAGEA10P43363 369 aaPredicted RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 ARHGAP4P98171 946 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 MCTP2Q6DN12 878 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 METTL7BQ6UX53 244 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 NLRX1Q86UT6 975 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 REXO1Q8N1G1 1221 aaKnown RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
CTSB-214ENST00000527243 CYP2W1Q8TAV3 490 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 TBC1D32Q96NH3 1257 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
CTSB-214ENST00000527243 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 MEIS1O00470 390 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 MAFGO15525 162 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 DTNBO60941 627 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 PPFIA4O75335 1185 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 F2P00734 622 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 NEDD9Q14511 834 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 DGKDQ16760 1214 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 SPATA33Q96N06 139 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
CTSB-214ENST00000527243 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms