RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 F2P00734 622 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 ACTN1P12814 892 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 KRT32Q14532 448 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 IL31RAQ8NI17 732 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 SCLYQ96I15 445 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 SPATA33Q96N06 139 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-207ENST00000527189 PBX4Q9BYU1 374 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 MLXIPQ9HAP2 919 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 CXXC1Q9P0U4 656 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-207ENST00000527189 GTF2IRD1Q9UHL9 959 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 MSRAQ9UJ68 235 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 SLC4A7Q9Y6M7 1214 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 MEIS2O14770 477 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 GGPS1O95749 300 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 HMGB1P09429 215 aaKnown RBP15.44■□□□□ 0.06
CAPN1-207ENST00000527189 PSEN2P49810 448 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
CAPN1-207ENST00000527189 SP2Q02086 613 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 RBL2Q08999 1139 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 NEDD9Q14511 834 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
CAPN1-207ENST00000527189 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 AFAP1L1Q8TED9 768 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
CAPN1-207ENST00000527189 REV3LO60673 3130 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 SPATA31C2B4DYI2 1134 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 FIBPO43427 364 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 NEFLP07196 543 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 UBA1P22314 1058 aaKnown RBP15.43■□□□□ 0.06
CAPN1-207ENST00000527189 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
CAPN1-207ENST00000527189 MFSD10Q14728 455 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 GDF6Q6KF10 455 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-207ENST00000527189 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 SENP7Q9BQF6 1050 aa15.43■□□□□ 0.06
CAPN1-207ENST00000527189 RBM28Q9NW13 759 aaKnown RBP15.43■□□□□ 0.06
CAPN1-207ENST00000527189 FOSL2P15408 326 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 PBX2P40425 430 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 PTK7Q13308 1070 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-207ENST00000527189 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 USP17L6PQ6QN14 398 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 TMTC3Q6ZXV5 915 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 DEFB128Q7Z7B8 93 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-207ENST00000527189 PHOSPHO2Q8TCD6 241 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 C16orf70Q9BSU1 422 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 HDAC6Q9UBN7 1215 aa15.42■□□□□ 0.06
CAPN1-207ENST00000527189 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 BAIAP3O94812 1187 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 SELPP16109 830 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 RXRAP19793 462 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 RCAN1P53805 252 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 SKAP1Q86WV1 359 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
CAPN1-207ENST00000527189 PPP1R13LQ8WUF5 828 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 SYMPKQ92797 1274 aaKnown RBP15.41■□□□□ 0.06
CAPN1-207ENST00000527189 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 PCDHA11Q9Y5I1 949 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
CAPN1-207ENST00000527189 ZBBXA8MT70 800 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 H3BRB1 525 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 TNFRSF10AO00220 468 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 NOP56O00567 594 aaKnown RBP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 MAFGO15525 162 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 ZNF286BP0CG31 522 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 RASEFQ8IZ41 740 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 KCNB2Q92953 911 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 GPRASP2Q96D09 838 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 ZFP91Q96JP5 570 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 TUT1Q9H6E5 874 aaKnown RBP15.4■□□□□ 0.06
CAPN1-207ENST00000527189 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
CAPN1-207ENST00000527189 hCG_1984214I3L0E3 225 aa15.39■□□□□ 0.05
CAPN1-207ENST00000527189 ZBTB43O43298 467 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms