RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 ECM1Q16610 540 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 MIIPQ5JXC2 388 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 DACT2Q5SW24 774 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
CHMP1B-201ENST00000526991 TTLL1O95922 423 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 C2orf54Q08AI8 447 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 BRD3Q15059 726 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 CERKLQ49MI3 558 aaPredicted RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 DHTKD1Q96HY7 919 aaPredicted RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 CCDC42Q96M95 316 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 PNMA5Q96PV4 448 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 SPZ1Q9BXG8 430 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 LAMB1P07942 1786 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 ZNF263O14978 683 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 GH2P01242 217 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 SLC1A4P43007 532 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 ADCY7P51828 1080 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 AMPD2Q01433 879 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 GABPAQ06546 454 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 DAGLBQ8NCG7 672 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 RIN2Q8WYP3 895 aaPredicted RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
CHMP1B-201ENST00000526991 PDE2AO00408 941 aaPredicted RBP13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 KCNA4P22459 653 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 FECHP22830 423 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 CSRNP1Q96S65 589 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 ROBO3Q96MS0 1386 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 EDIL3O43854 480 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 MOCS3O95396 460 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 ECE1P42892 770 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 UBXN2AP68543 259 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 CASP8Q14790 479 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 PTPROQ16827 1216 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 WHAMMP3Q1A5X7 153 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 HDXQ7Z353 690 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 DDX12PQ92771 950 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 BICDL2A1A5D9 508 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 NCK2O43639 380 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 CYLC1P35663 651 aaPredicted RBP13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 DGKZQ13574 1117 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 HAUS4Q9H6D7 363 aa13.28□□□□□ -0.28
CHMP1B-201ENST00000526991 BUB1O43683 1085 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 KRT86O43790 486 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 AKR1B10O60218 316 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 ERLIN1O75477 346 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 DPEP1P16444 411 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 HOXA13P31271 388 aaPredicted RBP13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 STAT3P40763 770 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 PRPHP41219 470 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 AMPD3Q01432 767 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 CNNM4Q6P4Q7 775 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 C7orf25Q9BPX7 421 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 L1RE1Q9UN81 338 aa13.27□□□□□ -0.28
CHMP1B-201ENST00000526991 A0A1W2PQC6 194 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 E9PMD0 336 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 RNASE9P60153 205 aaKnown RBP13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 KRT83P78385 493 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 ZBED6P86452 979 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 SPA17Q15506 151 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 DNAJC21Q5F1R6 531 aaKnown RBP13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 DNAAF5Q86Y56 855 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 CAPN6Q9Y6Q1 641 aa13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
CHMP1B-201ENST00000526991 PSMD14O00487 310 aa13.26□□□□□ -0.29
CHMP1B-201ENST00000526991 LAD1O00515 517 aa13.26□□□□□ -0.29
CHMP1B-201ENST00000526991 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
CHMP1B-201ENST00000526991 ICA1Q05084 483 aa13.26□□□□□ -0.29
CHMP1B-201ENST00000526991 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
CHMP1B-201ENST00000526991 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms