RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 INSL6Q9Y581 213 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 F5H6K3 240 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 H3BNC9 293 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 KPNA6O60684 536 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 NDUFB10O96000 172 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 HTRA4P83105 476 aaPredicted RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 EXOSC10Q01780 885 aaKnown RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 KLRC3Q07444 240 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 CTC1Q2NKJ3 1217 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 IGDCC4Q8TDY8 1250 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 ATOH1Q92858 354 aaPredicted RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 KIF2CQ99661 725 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
NEDD8-204ENST00000526430 CLDND1Q9NY35 253 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 NYAP2Q9P242 653 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
NEDD8-204ENST00000526430 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 MBTPS2O43462 519 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 MYL3P08590 195 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 CPA1P15085 419 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 SELPP16109 830 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 SMAD4Q13485 552 aaKnown RBP12.74□□□□□ -0.37
NEDD8-204ENST00000526430 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 EPC2Q52LR7 807 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-204ENST00000526430 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 RPAINQ86UA6 219 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
NEDD8-204ENST00000526430 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 SYNPO2Q9UMS6 1093 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 NOD1Q9Y239 953 aa12.74□□□□□ -0.37
NEDD8-204ENST00000526430 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 PRR23AA6NEV1 266 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 ID4P47928 161 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 ZXDAP98168 799 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 IKBKEQ14164 716 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
NEDD8-204ENST00000526430 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 EEPD1Q7L9B9 569 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 ASCL5Q7RTU5 278 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 NCOA7Q8NI08 942 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 ESR2Q92731 530 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 CTAGE1Q96RT6 745 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 KRT23Q9C075 422 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 ZNF287Q9HBT7 754 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
NEDD8-204ENST00000526430 CACNA1GO43497 2377 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
NEDD8-204ENST00000526430 A6NJR5 290 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 STXBP3O00186 592 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 NBNO60934 754 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-204ENST00000526430 GPM6BQ13491 265 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 PTGISQ16647 500 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 TCTN1Q2MV58 587 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-204ENST00000526430 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-204ENST00000526430 TMEM47Q9BQJ4 181 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 KIAA1671Q9BY89 1806 aa12.72□□□□□ -0.37
NEDD8-204ENST00000526430 MYO10Q9HD67 2058 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEDD8-204ENST00000526430 AVPR2P30518 371 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 NBL1P41271 181 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
NEDD8-204ENST00000526430 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 TTC14Q96N46 770 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
NEDD8-204ENST00000526430 NCOR2Q9Y618 2525 aa12.71□□□□□ -0.37
NEDD8-204ENST00000526430 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 TTLL1O95922 423 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
NEDD8-204ENST00000526430 NT5C2P49902 561 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 CBX2Q14781 532 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-204ENST00000526430 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
NEDD8-204ENST00000526430 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
NEDD8-204ENST00000526430 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms