RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 SMIM5Q71RC9 77 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 AMIGO3Q86WK7 504 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 IFNL2Q8IZJ0 200 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 ATG4CQ96DT6 458 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
SVIP-202ENST00000525670 PHACTR3Q96KR7 559 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 G6PC3Q9BUM1 346 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 PRKRIP1Q9H875 184 aaPredicted RBP6.8□□□□□ -1.32
SVIP-202ENST00000525670 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 ADAMTS1Q9UHI8 967 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 GPR160Q9UJ42 338 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 SMG5Q9UPR3 1016 aaKnown RBP6.8□□□□□ -1.32
SVIP-202ENST00000525670 TAF1LQ8IZX4 1826 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 PEX10O60683 326 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
SVIP-202ENST00000525670 SLC39A6Q13433 755 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 WDR43Q15061 677 aaKnown RBP eCLIP6.79□□□□□ -1.32
SVIP-202ENST00000525670 SEZ6Q53EL9 994 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 OVOS1Q6IE37 1185 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 MCM10Q7L590 875 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 PIGBQ92521 554 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 TCTN2Q96GX1 697 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 THUMPD2Q9BTF0 503 aaKnown RBP6.79□□□□□ -1.32
SVIP-202ENST00000525670 PDGFDQ9GZP0 370 aaPredicted RBP6.79□□□□□ -1.32
SVIP-202ENST00000525670 ZNF552Q9H707 407 aaPredicted RBP6.79□□□□□ -1.32
SVIP-202ENST00000525670 UBP1Q9NZI7 540 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 CCNL1Q9UK58 526 aaPredicted RBP6.79□□□□□ -1.32
SVIP-202ENST00000525670 NUDCQ9Y266 331 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 MAP3K5Q99683 1374 aa6.79□□□□□ -1.32
SVIP-202ENST00000525670 MAPK8IP3Q9UPT6 1336 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 BCL9O00512 1426 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 ANP32CO43423 234 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 PSPNO60542 156 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
SVIP-202ENST00000525670 ZNF165P49910 485 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 PCBP3P57721 371 aaKnown RBP6.78□□□□□ -1.32
SVIP-202ENST00000525670 CLCQ05315 142 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
SVIP-202ENST00000525670 NLRC3Q7RTR2 1065 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 TMC3Q7Z5M5 1100 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 LINC00116Q8NCU8 138 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 ZMYM5Q9UJ78 669 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 TCFL5Q9UL49 500 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 C4BP0C0L5 1744 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 TJP1Q07157 1748 aa6.78□□□□□ -1.32
SVIP-202ENST00000525670 SIPA1L3O60292 1781 aaPredicted RBP6.77□□□□□ -1.33
SVIP-202ENST00000525670 CASZ1Q86V15 1759 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 SSU72P8A0A1W2PR75 194 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 NOTOA8MTQ0 251 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 RNMTO43148 476 aaKnown RBP6.77□□□□□ -1.33
SVIP-202ENST00000525670 CLEC3AO75596 197 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 ZBTB7AO95365 584 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 MCM4P33991 863 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 PDE6BP35913 854 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 KIR2DL1P43626 348 aaPredicted RBP6.77□□□□□ -1.33
SVIP-202ENST00000525670 KIR2DL2P43627 348 aaPredicted RBP6.77□□□□□ -1.33
SVIP-202ENST00000525670 AMOTQ4VCS5 1084 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 CIAPIN1Q6FI81 312 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 NT5C1AQ9BXI3 368 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 FOXP3Q9BZS1 431 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 MCOLN1Q9GZU1 580 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 STK32BQ9NY57 414 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 MRC1P22897 1456 aa6.77□□□□□ -1.33
SVIP-202ENST00000525670 COL5A3P25940 1745 aaPredicted RBP6.76□□□□□ -1.33
SVIP-202ENST00000525670 MYOCOSA0A1B0GUC4 107 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 TMEM82A0PJX8 343 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 SIGLEC6O43699 453 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 SEMA7AO75326 666 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
SVIP-202ENST00000525670 NLRX1Q86UT6 975 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 NKD1Q969G9 470 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 MAP6Q96JE9 813 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 PRDM14Q9GZV8 571 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 ADAMTS7Q9UKP4 1686 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 KCPQ6ZWJ8 1503 aa6.76□□□□□ -1.33
SVIP-202ENST00000525670 TEX51A0A1B0GUA7 166 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 KCNQ3O43525 872 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 NRDCO43847 1150 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 PRAMEF1O95521 474 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 HSP90AB1P08238 724 aaKnown RBP6.75□□□□□ -1.33
SVIP-202ENST00000525670 SYPP08247 313 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
SVIP-202ENST00000525670 LINC00310P59036 64 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 DLG4P78352 724 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 TEFQ10587 303 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 ITPK1Q13572 414 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 SLC14A2Q15849 920 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 MIS18AQ9NYP9 233 aa6.75□□□□□ -1.33
SVIP-202ENST00000525670 UBR3Q6ZT12 1888 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms