RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 CHD7Q9P2D1 2997 aa9.87□□□□□ -0.83
DEPDC1-205ENST00000525124 ADD3Q9UEY8 706 aaKnown RBP9.87□□□□□ -0.83
DEPDC1-205ENST00000525124 GRIN2DO15399 1336 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 RBM47A0AV96 593 aaKnown RBP9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 H3BM21 787 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 CSF2RAP15509 400 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 IKQ13123 557 aaPredicted RBP9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 ITGA7Q13683 1181 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 GRIN2CQ14957 1233 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 RAB30Q15771 203 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 FSCN1Q16658 493 aaKnown RBP9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 DUSP28Q4G0W2 176 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 MUM1L1Q5H9M0 696 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 ZNF365Q70YC5 407 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 OTUD7AQ8TE49 926 aaPredicted RBP9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 IRF7Q92985 503 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 TTC14Q96N46 770 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 PBX4Q9BYU1 374 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 AP5M1Q9H0R1 490 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 CCPG1Q9ULG6 757 aa9.86□□□□□ -0.83
DEPDC1-205ENST00000525124 MUC3AQ02505 3323 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 NKRFO15226 690 aaKnown RBP eCLIP9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 PFKMP08237 780 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 TOP1P11387 765 aaKnown RBP9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 ALDH5A1P51649 535 aaPredicted RBP9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 BEX3Q00994 111 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 CXCL17Q6UXB2 119 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 RPUSD2Q8IZ73 545 aaKnown RBP9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 ZNF511Q8NB15 262 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 HIPK3Q9H422 1215 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 TET1Q8NFU7 2136 aa9.85□□□□□ -0.83
DEPDC1-205ENST00000525124 WDR19Q8NEZ3 1342 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 B4GALT4O60513 344 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 NMT2O60551 498 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 FGAP02671 866 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 FGBP02675 491 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 SUPT20HL2P0C7V6 817 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 SNHG28P0DPA3 235 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 EDNRBP24530 442 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 VARSP26640 1264 aaKnown RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 CYP2C18P33260 490 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 CPT1AP50416 773 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 PDE1AP54750 535 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 HDAC1Q13547 482 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 AAMPQ13685 434 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 VPS53Q5VIR6 699 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 SYDE2Q5VT97 1194 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 FBXO16Q8IX29 292 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 ZSCAN1Q8NBB4 408 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 RGS22Q8NE09 1264 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 DNERQ8NFT8 737 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 TMEM47Q9BQJ4 181 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 NOC4LQ9BVI4 516 aaKnown RBP9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 PDGFCQ9NRA1 345 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 SIP14410 1827 aa9.84□□□□□ -0.83
DEPDC1-205ENST00000525124 KPNA6O60684 536 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 ACRP10323 421 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 HSPD1P10809 573 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 PDHBP11177 359 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 PTPN11Q06124 597 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 NNTQ13423 1086 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 BAATQ14032 418 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 CCDC96Q2M329 555 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 DESI1Q6ICB0 168 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 NSMFQ6X4W1 530 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 NOL8Q76FK4 1167 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 RASGRP2Q7LDG7 609 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 ATXN2LQ8WWM7 1075 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 MPHOSPH6Q99547 160 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 WNT8AQ9H1J5 351 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 ALDH8A1Q9H2A2 487 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 INCENPQ9NQS7 918 aa9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 ISY1Q9ULR0 285 aaKnown RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-205ENST00000525124 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 RAD50Q92878 1312 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 GRXCR1A8MXD5 290 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 B4DLN1 442 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 NFIBO00712 420 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 RFC2P35250 354 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 MRPL12P52815 198 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 RRP1P56182 461 aaKnown RBP9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 ZNF543Q08ER8 600 aa9.82□□□□□ -0.84
DEPDC1-205ENST00000525124 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms