RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 STAT5AP42229 794 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 GRIA2P42262 883 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 PUM1Q14671 1186 aaKnown RBP eCLIP2.95□□□□□ -1.94
CD44-212ENST00000524922 MROH9Q5TGP6 573 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 PROSER1Q86XN7 944 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 TTLL6Q8N841 843 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 TXNDC5Q8NBS9 432 aaKnown RBP2.95□□□□□ -1.94
CD44-212ENST00000524922 ARRDC4Q8NCT1 418 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 DNERQ8NFT8 737 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 ZCCHC14Q8WYQ9 949 aaKnown RBP2.95□□□□□ -1.94
CD44-212ENST00000524922 ANAPC16Q96DE5 110 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 YTHDC1Q96MU7 727 aaKnown RBP2.95□□□□□ -1.94
CD44-212ENST00000524922 WWC2-AS2Q96NR7 200 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 SAMD11Q96NU1 681 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 TMPRSS5Q9H3S3 457 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 CD248Q9HCU0 757 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 SMPD4Q9NXE4 827 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 PPP4R1LQ9P1A2 415 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 INVSQ9Y283 1065 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 TIMM13Q9Y5L4 95 aaPredicted RBP2.95□□□□□ -1.94
CD44-212ENST00000524922 ARAP1Q96P48 1450 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 KIF21AQ7Z4S6 1674 aa2.95□□□□□ -1.94
CD44-212ENST00000524922 MROH6A6NGR9 719 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 C9orf118A6NHY6 69 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 DDX3XO00571 662 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD44-212ENST00000524922 AKAP8O43823 692 aaKnown RBP2.94□□□□□ -1.94
CD44-212ENST00000524922 SUSD5O60279 629 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 FGRP09769 529 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 HOXC12P31275 282 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 ETFBP38117 255 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 MLLT6P55198 1093 aaPredicted RBP2.94□□□□□ -1.94
CD44-212ENST00000524922 ZNF827Q17R98 1081 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 CPZQ66K79 652 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 IQCEQ6IPM2 695 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 TEPPQ6URK8 271 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 CD300LDQ6UXZ3 194 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 TTLL7Q6ZT98 887 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 CEP68Q76N32 757 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 MILR1Q7Z6M3 343 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 FAM178BQ8IXR5 827 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 Q8N1X5 172 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 CRACR2BQ8N4Y2 399 aaPredicted RBP2.94□□□□□ -1.94
CD44-212ENST00000524922 TMEM145Q8NBT3 493 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 USP33Q8TEY7 942 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD44-212ENST00000524922 BORCS6Q96GS4 357 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 C8orf49Q96NF6 230 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 PDGFDQ9GZP0 370 aaPredicted RBP2.94□□□□□ -1.94
CD44-212ENST00000524922 PCDH18Q9HCL0 1135 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 FANCD2Q9BXW9 1451 aa2.94□□□□□ -1.94
CD44-212ENST00000524922 H7BY64 318 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 NOP56O00567 594 aaKnown RBP2.93□□□□□ -1.94
CD44-212ENST00000524922 GPR42O15529 346 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 LTBRP36941 435 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 RPL11P62913 178 aaKnown RBP2.93□□□□□ -1.94
CD44-212ENST00000524922 KCNAB2Q13303 367 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 R3HDM1Q15032 1099 aaKnown RBP2.93□□□□□ -1.94
CD44-212ENST00000524922 SLC10A6Q3KNW5 377 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 MCTP2Q6DN12 878 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 LIMS2Q7Z4I7 341 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 CPLX3Q8WVH0 158 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 DIO2Q92813 273 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 AP5M1Q9H0R1 490 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 BTG4Q9NY30 223 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 DTLQ9NZJ0 730 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 RBPJLQ9UBG7 517 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 PRKAG3Q9UGI9 489 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 INPP5FQ9Y2H2 1132 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 MRVI1Q9Y6F6 885 aa2.93□□□□□ -1.94
CD44-212ENST00000524922 HGSO14964 777 aaPredicted RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 MEFVO15553 781 aaPredicted RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 SMARCA5O60264 1052 aaPredicted RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 MSCO60682 206 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 CPP00450 1065 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 IL13P35225 146 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 ECI1P42126 302 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 EPHB4P54760 987 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 RBM10P98175 930 aaKnown RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 ICAM4Q14773 271 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 HABP4Q5JVS0 413 aaKnown RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 ZC3H18Q86VM9 953 aaKnown RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 PPIL6Q8IXY8 311 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 LGI4Q8N135 537 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 TMEM169Q96HH4 297 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 PTPN18Q99952 460 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 MEGF9Q9H1U4 602 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 ACTR10Q9NZ32 417 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 PPARGC1AQ9UBK2 798 aaKnown RBP2.92□□□□□ -1.94
CD44-212ENST00000524922 CLASP1Q7Z460 1538 aa2.92□□□□□ -1.94
CD44-212ENST00000524922 A0A1W2PQU0 124 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 ZBTB7CA1YPR0 619 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 PATE3B3GLJ2 98 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 LAMTOR5O43504 91 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 DLX3O60479 287 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 KLHL18O94889 574 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 SNRPB2P08579 225 aaKnown RBP2.91□□□□□ -1.94
CD44-212ENST00000524922 NAT2P11245 290 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 GTF2A2P52657 109 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 ZXDAP98168 799 aa2.91□□□□□ -1.94
CD44-212ENST00000524922 KIAA2012Q0VF49 1180 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms