RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 IKBKBO14920 756 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
CSTF3-205ENST00000524775 MED24O75448 989 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.29
CSTF3-205ENST00000524775 MYL1P05976 194 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 ZNF76P36508 570 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 FKBP1BP68106 108 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 PGM5Q15124 567 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 KRT79Q5XKE5 535 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSTF3-205ENST00000524775 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 AOPEPQ8N6M6 819 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 MB21D1Q8N884 522 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 MLKLQ8NB16 471 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 SNX29Q8TEQ0 813 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 RAD54LQ92698 747 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 CALML4Q96GE6 196 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 PDCD2LQ9BRP1 358 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 A1CFQ9NQ94 594 aaKnown RBP13.21□□□□□ -0.29
CSTF3-205ENST00000524775 CYP39A1Q9NYL5 469 aa13.21□□□□□ -0.29
CSTF3-205ENST00000524775 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.29
CSTF3-205ENST00000524775 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 MYMKA6NI61 221 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 ADCY5O95622 1261 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 RPN1P04843 607 aaKnown RBP13.2□□□□□ -0.3
CSTF3-205ENST00000524775 HERVK_113P62684 666 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 PPP2R5CQ13362 524 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 MCM6Q14566 821 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 KCNB1Q14721 858 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
CSTF3-205ENST00000524775 CST9Q5W186 159 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 NSMFQ6X4W1 530 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 FASTKD5Q7L8L6 764 aaKnown RBP13.2□□□□□ -0.3
CSTF3-205ENST00000524775 VSIG10LQ86VR7 867 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 TRIM9Q9C026 710 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
CSTF3-205ENST00000524775 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 JADE2Q9NQC1 790 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 RBPJLQ9UBG7 517 aa13.2□□□□□ -0.3
CSTF3-205ENST00000524775 ASTN1O14525 1302 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 DOCK3Q8IZD9 2030 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 MARCH6O60337 910 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 EIF2AK2P19525 551 aaKnown RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 RPA1P27694 616 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 CCT6AP40227 531 aaKnown RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 SEMA3FQ13275 785 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 XRRA1Q6P2D8 792 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 CATSPER3Q86XQ3 398 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 POLR3CQ9BUI4 534 aaPredicted RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 AGO4Q9HCK5 861 aaKnown RBP13.19□□□□□ -0.3
CSTF3-205ENST00000524775 TXNRD2Q9NNW7 524 aa13.19□□□□□ -0.3
CSTF3-205ENST00000524775 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 RGS20O76081 388 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 EHHADHQ08426 723 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 Q3C1V9 767 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 ZNF658Q5TYW1 1059 aaPredicted RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 RIT2Q99578 217 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
CSTF3-205ENST00000524775 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
CSTF3-205ENST00000524775 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 E9PMD0 336 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
CSTF3-205ENST00000524775 NR3C2P08235 984 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 ZNF75DP51815 510 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 PSMC6P62333 389 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
CSTF3-205ENST00000524775 PLS1Q14651 629 aa13.17□□□□□ -0.3
CSTF3-205ENST00000524775 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms