RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FRS2Q8WU20 508 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 SEC14L1Q92503 715 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 DPF3Q92784 378 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 NOX5Q96PH1 765 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 LNPKQ9C0E8 428 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 CAPN10Q9HC96 672 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 SIT1Q9Y3P8 196 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 HECW1Q76N89 1606 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 PTPRGP23470 1445 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 UHRF1BP1LA0JNW5 1464 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 CDK13Q14004 1512 aaKnown RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 MAGI3Q5TCQ9 1506 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 KDM5BQ9UGL1 1544 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 C22orf46C9J442 243 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 SGSM2O43147 1006 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 SMARCA5O60264 1052 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 SCG5P05408 212 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 C8BP07358 591 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 HOXC12P31275 282 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 SARSP49591 514 aaKnown RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 RPL11P62913 178 aaKnown RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 CYP4F3Q08477 520 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 KCNAB2Q13303 367 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 TESK1Q15569 626 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 INF2Q27J81 1249 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 C6orf15Q6UXA7 325 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 ZC3H18Q86VM9 953 aaKnown RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 ZNF761Q86XN6 746 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 TEX2Q8IWB9 1127 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 HOMEZQ8IX15 550 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 DDX11Q96FC9 970 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 C11orf84Q9BUA3 381 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 SPATA6Q9NWH7 488 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-208ENST00000524652 ACTR10Q9NZ32 417 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 X6R8D5 127 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 UACAQ9BZF9 1416 aa4.62□□□□□ -1.67
CSDE1-208ENST00000524652 PPRC1Q5VV67 1664 aaKnown RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 TSPOAP1O95153 1857 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 SMAD7O15105 426 aaKnown RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 MYO1BO43795 1136 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 CPP00450 1065 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 FPR2P25090 351 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 RPL13P26373 211 aaKnown RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 ACBD5Q5T8D3 534 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 VPS37DQ86XT2 251 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 KYQ8NBH2 561 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 ADAMTS17Q8TE56 1095 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 BTN2A2Q8WVV5 523 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 DIO2Q92813 273 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 CCDC140Q96MF4 163 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 GORASP1Q9BQQ3 440 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 NGRNQ9NPE2 291 aaKnown RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 TIMM13Q9Y5L4 95 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-208ENST00000524652 ATP10BO94823 1461 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 DIP2BQ9P265 1576 aa4.61□□□□□ -1.67
CSDE1-208ENST00000524652 K7ESM1 405 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 MEFVO15553 781 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-208ENST00000524652 SUSD5O60279 629 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 SSBP05455 408 aaKnown RBP eCLIP4.6□□□□□ -1.67
CSDE1-208ENST00000524652 ITGAVP06756 1048 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 CNR2P34972 360 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 THBS2P35442 1172 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 SMAD4Q13485 552 aaKnown RBP4.6□□□□□ -1.67
CSDE1-208ENST00000524652 CHRNA2Q15822 529 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 SV2CQ496J9 727 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 FERMT3Q86UX7 667 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 NLRP10Q86W26 655 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 CCDC103Q8IW40 242 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 FAM178BQ8IXR5 827 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 FAM126BQ8IXS8 530 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 LGR4Q9BXB1 951 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 BTG4Q9NY30 223 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 PRKAG3Q9UGI9 489 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 ZNF652Q9Y2D9 606 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 DUSP10Q9Y6W6 482 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 FMN1Q68DA7 1419 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 VPS8Q8N3P4 1428 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 CASKIN1Q8WXD9 1431 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 FYCO1Q9BQS8 1478 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 MAPKBP1O60336 1514 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 EPRSP07814 1512 aaKnown RBP4.6□□□□□ -1.67
CSDE1-208ENST00000524652 KIF14Q15058 1648 aa4.6□□□□□ -1.67
CSDE1-208ENST00000524652 TBX1O43435 398 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 SNRPB2P08579 225 aaKnown RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 ITGA1P56199 1179 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 TIAM1Q13009 1591 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 GNL2Q13823 731 aaKnown RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 FXNQ16595 210 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 FAM26FQ5R3K3 315 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 CDC42BPAQ5VT25 1732 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 LARP1BQ659C4 914 aaKnown RBP4.59□□□□□ -1.67
CSDE1-208ENST00000524652 TTC37Q6PGP7 1564 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 HHIPL2Q6UWX4 724 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 CD300LDQ6UXZ3 194 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 CEP68Q76N32 757 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 MILR1Q7Z6M3 343 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 TTLL6Q8N841 843 aa4.59□□□□□ -1.67
CSDE1-208ENST00000524652 KREMEN2Q8NCW0 462 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms