RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 PPIL6Q8IXY8 311 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 DDX1Q92499 740 aaKnown RBP4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 DIO2Q92813 273 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 DDX11Q96FC9 970 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 TANGO6Q9C0B7 1094 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 TMEFF2Q9UIK5 374 aaPredicted RBP4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 U2SURPO15042 1029 aaKnown RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 MYO1BO43795 1136 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 SMARCA5O60264 1052 aaPredicted RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 CPP00450 1065 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 C8BP07358 591 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 INSRRP14616 1297 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 FPR2P25090 351 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 RPL13P26373 211 aaKnown RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 BCL6P41182 706 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 GFRA1P56159 465 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 KCNAB2Q13303 367 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 RAB33AQ14088 237 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 E4F1Q66K89 784 aaPredicted RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 MIB1Q86YT6 1006 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 CKAP2LQ8IYA6 745 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 TMEM145Q8NBT3 493 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 ADAMTS17Q8TE56 1095 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 CHAMP1Q96JM3 812 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 GPR20Q99678 358 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 GORASP1Q9BQQ3 440 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 C11orf84Q9BUA3 381 aaPredicted RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 PCGF6Q9BYE7 350 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 TIMM13Q9Y5L4 95 aaPredicted RBP4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 TNIKQ9UKE5 1360 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 SOGA1O94964 1423 aa4.89□□□□□ -1.63
LINCR-0001-203ENST00000524047 CEP164Q9UPV0 1460 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 CCDC85CA6NKD9 419 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 SCG5P05408 212 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 ATP2B1P20020 1258 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 THBS2P35442 1172 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 LTBRP36941 435 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 SMAD4Q13485 552 aaKnown RBP4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 ETV3LQ6ZN32 361 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 CEP68Q76N32 757 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 KYQ8NBH2 561 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 KREMEN2Q8NCW0 462 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 SEC14L1Q92503 715 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 TRMT2BQ96GJ1 504 aaKnown RBP4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 IER2Q9BTL4 223 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 AP5M1Q9H0R1 490 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 TMPRSS5Q9H3S3 457 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 PCDHA2Q9Y5H9 948 aa4.88□□□□□ -1.63
LINCR-0001-203ENST00000524047 RUSC2Q8N2Y8 1516 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 IQCA1LA6NCM1 817 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 ARNTLO00327 626 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 SGSM2O43147 1006 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 LCP1P13796 627 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 GTF2F1P35269 517 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 SLC6A11P48066 632 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 ADAM17P78536 824 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 KIAA2012Q0VF49 1180 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 HSP90AA2PQ14568 343 aaPredicted RBP4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 FAM26FQ5R3K3 315 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 ACBD5Q5T8D3 534 aaPredicted RBP4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 DENND5AQ6IQ26 1287 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 RIOX2Q8IUF8 465 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 TTC9BQ8N6N2 239 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 TTLL6Q8N841 843 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 RCBTB1Q8NDN9 531 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 KCTD13Q8WZ19 329 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 TMEM169Q96HH4 297 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 SAMD11Q96NU1 681 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 SMPD4Q9NXE4 827 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 CUX1P39880 1505 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
LINCR-0001-203ENST00000524047 PLATP00750 562 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 GTF2A2P52657 109 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 TBC1D10BQ4KMP7 808 aaPredicted RBP4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 PRR31Q5SQ13 230 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 SLC35F1Q5T1Q4 408 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 MROH9Q5TGP6 573 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 USP53Q70EK8 1073 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 ZC3H18Q86VM9 953 aaKnown RBP4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 NLRP10Q86W26 655 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 Q8N1Y9 231 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 C1orf159Q96HA4 380 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 C1QTNF3Q9BXJ4 246 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 NGRNQ9NPE2 291 aaKnown RBP4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 FBXL7Q9UJT9 491 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 COA3Q9Y2R0 106 aaPredicted RBP4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 CEP162Q5TB80 1403 aa4.86□□□□□ -1.63
LINCR-0001-203ENST00000524047 C1QTNF3-AMACRE9PGA6 284 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 PRODHO43272 600 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 MAP4K2Q12851 820 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 LSAMPQ13449 338 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 CD300LDQ6UXZ3 194 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 MILR1Q7Z6M3 343 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 FAM124AQ86V42 546 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
LINCR-0001-203ENST00000524047 LGI4Q8N135 537 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms